DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CtsL3 and ctsbb

DIOPT Version :10

Sequence 1:NP_649608.1 Gene:CtsL3 / 40741 FlyBaseID:FBgn0037396 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_001418075.1 Gene:ctsbb / 569298 ZFINID:ZDB-GENE-070323-1 Length:326 Species:Danio rerio


Alignment Length:284 Identity:75/284 - (26%)
Similarity:122/284 - (42%) Gaps:78/284 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 LTETVNYKRYDQITEGID----WRQYGYISPVGDQGTECLSCWAF-STSGVLEAHMAKKYGNLVP 165
            |..||.:....::.:..|    |.....::.:.|||: |.||||| :...:.:.......|...|
Zfish    63 LPHTVKHSTNVKLPDSFDLRDQWPNCKTLNQIRDQGS-CGSCWAFGAVESISDRICIHSKGKQSP 126

  Fly   166 -LSPKHLVDCVPYPNNGCSGGWVSVAFNYTRDHGIATKESY-------PYE-------------P 209
             :|.:.|:.|......|||||:.:.|::|.|..|:.|...|       ||.             |
Zfish   127 EISAEDLLSCCDQCGFGCSGGFPAEAWDYWRRSGLVTGGLYNSDVGCRPYSIAPCEHHVNGTRPP 191

  Fly   210 VSGE---------CL------WKSDRSAGTLSGYVTLGNYDERELAEVVYNIGPVAVSIDHLHEE 259
            .|||         |:      :|.|:..|:....|.   .|::::...:|..|||..:.. ::|:
Zfish   192 CSGEQDTPKCTGVCIPKYSVPYKQDKHFGSKVYNVP---SDQQQIMTELYTNGPVEAAFT-VYED 252

  Fly   260 FDQYSGGVLSIPACRSKRQDLT------HSVLLVGFGTHRKWGD-----YWIIKNSYGTDWGESG 313
            |..|..||.         |.||      |:|.::|      ||:     :|::.||:.:|||::|
Zfish   253 FPLYKSGVY---------QHLTGSALGGHAVKILG------WGEENGTPFWLVANSWNSDWGDNG 302

  Fly   314 YLKLARNANNMCG-----VASLPQ 332
            |.|:.| .::.||     ||.||:
Zfish   303 YFKILR-GHDECGIESEMVAGLPK 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsL3NP_649608.1 Inhibitor_I29 30..85 CDD:462410
Peptidase_C1A 120..334 CDD:239068 72/270 (27%)
ctsbbNP_001418075.1 Propeptide_C1 23..60 CDD:462365
Peptidase_C1A_CathepsinB 76..322 CDD:239111 69/266 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.