DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsL3 and Ctss

DIOPT Version :10

Sequence 1:NP_649608.1 Gene:CtsL3 / 40741 FlyBaseID:FBgn0037396 Length:336 Species:Drosophila melanogaster
Sequence 2:XP_063138486.1 Gene:Ctss / 50654 RGDID:621513 Length:342 Species:Rattus norvegicus


Alignment Length:322 Identity:115/322 - (35%)
Similarity:172/322 - (53%) Gaps:30/322 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 DTEWDQYKAKYNKQYR--NRDKYHRALYEQRVLAVESHNQLYLQGKVAFKMGLNKFSDTDQRILF 89
            |..||.:|..:.|:|:  |.:...|.::|:.:..:..||..:..|..::.:|:|...|.....:.
  Rat    35 DHHWDLWKKTHEKEYKDQNEEDVRRLIWEKNLKFIMLHNLEHSMGMHSYSVGMNHMGDMTPEEVI 99

  Fly    90 NYRSSIPAP--------LETSTNALTETVNYKRYDQITEGIDWRQYGYISPVGDQGTECLSCWAF 146
            .|..|:..|        |::|:|           ..:.:.:|||:.|.::.|..||: |.|||||
  Rat   100 GYMGSLRIPRHWNRSGTLKSSSN-----------QTLPDSVDWREKGCVTNVKYQGS-CGSCWAF 152

  Fly   147 STSGVLEAHMAKKYGNLVPLSPKHLVDC---VPYPNNGCSGGWVSVAFNYTRDH-GIATKESYPY 207
            |..|.||..:..|.|.||.||.::||||   ..|.|.||.||:::.||.|..|: ||.::.||||
  Rat   153 SAVGALEGQLKLKTGKLVSLSAQNLVDCSTEEKYGNKGCGGGFMTEAFQYIIDNGGIDSEASYPY 217

  Fly   208 EPVSGECLWKSDRSAGTLSGYVTLGNYDERELAEVVYNIGPVAVSIDHLHEEFDQYSGGVLSIPA 272
            :.:..:|.:.....|.|.|.|:.|...||..|.|.|...|||:|.||..|..|..|..||...|:
  Rat   218 KAMDEKCHYDPKNRAATCSRYIELPFGDEEALKEAVATKGPVSVGIDASHSSFFLYQSGVYDDPS 282

  Fly   273 CRSKRQDLTHSVLLVGFGTHRKWGDYWIIKNSYGTDWGESGYLKLARNANNMCGVASLPQYP 334
            |   .:::.|.||:||:|| ....|||::|||:|..:|:.||:::|||..|.||:||...||
  Rat   283 C---TENVNHGVLVVGYGT-LDGKDYWLVKNSWGLHFGDQGYIRMARNNKNHCGIASYCSYP 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsL3NP_649608.1 Inhibitor_I29 30..85 CDD:462410 14/56 (25%)
Peptidase_C1A 120..334 CDD:239068 92/217 (42%)
CtssXP_063138486.1 None

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