Protein Alignment CtsL3 and Swim

DIOPT Version :10

• Sequence 1: NP_649608.1
• Gene: CtsL3 / 40741
• FlyBaseID: FBgn0037396
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_611652.2
• Gene: Swim / 37537
• FlyBaseID: FBgn0034709
• Length: 431
• Species: Drosophila melanogaster
• Alignment Length: 343
• Identity: 93/343 - (27%)
• Similarity: 136/343 - (39%)
• Gaps: 63/343 - (18%)

  Fly    33 YKAKYNKQYRNRDKYHRALYEQRV-----------LAVESHNQLYLQGKVA----------FKMG 76
            |.:|||..:.|.::. |.|....|           ..|.|.|.::..|..|          :..|
  Fly    97 YFSKYNTTWDNCNEC-RCLEGGSVQCDEDLCLTDDAIVHSVNSIHRLGWSARKYDQWWGRKYSEG 160

  Fly    77 LNKFSDTDQRILFNYRSSIPAPLETSTNALTETVNYKRYDQITEGID-WRQYGYISPVGDQGTEC 140
            |.....|.:.   .||......|:..|:.|..:.|         .:| |.  .|||.|.|||. |
  Fly   161 LKLRLGTKEP---TYRVKAMTRLKNPTDGLPSSFN---------ALDKWS--SYISEVPDQGW-C 210

  Fly   141 LSCWAFSTSGVLEAHMA--KKYGNLVPLSPKHLVDCVPYPNNGCSGGWVSVAFNYTRDHGIATKE 203
            .:.|..||:.|.....|  .|....|.||.::::.|. ....||.||.:..|:.|....|:..:.
  Fly   211 GASWVLSTTSVASDRFAIQSKGKENVQLSAQNILSCT-RRQQGCEGGHLDAAWRYLHKKGVVDEN 274

  Fly   204 SYPYEPVSGECLWKSDRSAGTLSGYVTLGNYD---------------ERELAEVVYNIGPVAVSI 253
            .|||......|..:.:..:...:|.....|.|               |.::...:::.|||..::
  Fly   275 CYPYTQHRDTCKIRHNSRSLRANGCQKPVNVDRDSLYTVGPAYSLNREADIMAEIFHSGPVQATM 339

  Fly   254 DHLHEEFDQYSGGVLSIPACRSKRQDLTHSVLLVGFGTHRKWGDYWIIKNSYGTDWGESGYLKLA 318
             .::.:|..|||||....|...|.....|||.|||:|.......|||..||:|:.|||.||.::.
  Fly   340 -RVNRDFFAYSGGVYRETAANRKAPTGFHSVKLVGWGEEHNGEKYWIAANSWGSWWGEHGYFRIL 403

  Fly   319 RNANNMCGV-----ASLP 331
            |.:|. ||:     ||.|
  Fly   404 RGSNE-CGIEEYVLASWP 420

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CtsL3	NP_649608.1	Inhibitor_I29	30..85	CDD:462410	16/72 (22%)
		Peptidase_C1A	120..334	CDD:239068	71/235 (30%)
Swim	NP_611652.2	Somatomedin_B	41..84	CDD:460034
		Peptidase_C1A_CathepsinB	188..417	CDD:239111	69/243 (28%)