DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsL3 and Tinag

DIOPT Version :10

Sequence 1:NP_649608.1 Gene:CtsL3 / 40741 FlyBaseID:FBgn0037396 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_001005549.1 Gene:Tinag / 300846 RGDID:1359482 Length:475 Species:Rattus norvegicus


Alignment Length:272 Identity:76/272 - (27%)
Similarity:119/272 - (43%) Gaps:43/272 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 FNYRSSI--PAPLETSTNALTETVNYKRYDQITEGI-DWRQYGYISPVGDQGTECLSCWAFSTSG 150
            |.:|...  |:|:..|.|.:  |.:|.|.|.....| .::..|:.....|| ..|.:.|||||:.
  Rat   188 FKFRLGTLPPSPMLLSMNEM--TASYPRADLPEVFIASYKWPGWTHGPLDQ-KNCAASWAFSTAS 249

  Fly   151 VLEAHMA--KKYGNLVPLSPKHLVDCVPYPNNGCSGGWVSVAFNYTRDHGIATKESYPY---EPV 210
            |....:|  .|......|||::|:.|.....:||:.|.:..|:.:.|..|:.:...||.   :..
  Rat   250 VAADRIAIQSKGRYTANLSPQNLISCCAKNRHGCNSGSIDRAWWFLRKRGLVSHACYPLFKEQST 314

  Fly   211 SGECLWKSDRSAGTLSGYVT---------------------LGNYDERELAEVVYNIGPVAVSID 254
            :......:.||.|....:.|                     :.:.:...:.|::.| |||. :|.
  Rat   315 NNNSCAMASRSDGRGKRHATRPCPNSFEKSNRIYQCSPPYRISSNETEIMREIIQN-GPVQ-AIM 377

  Fly   255 HLHEEFDQYSGG----VLSIPACRSKRQDL-THSVLLVGFGTHR----KWGDYWIIKNSYGTDWG 310
            .:||:|..|..|    |:|......|.:.| ||:|.|.|:||.|    |...:||..||:|..||
  Rat   378 QVHEDFFYYKTGIYRHVVSTNEEPEKYRKLRTHAVKLTGWGTLRGAQGKKEKFWIAANSWGKSWG 442

  Fly   311 ESGYLKLARNAN 322
            |:||.::.|..|
  Rat   443 ENGYFRILRGVN 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsL3NP_649608.1 Inhibitor_I29 30..85 CDD:462410
Peptidase_C1A 120..334 CDD:239068 66/239 (28%)
TinagNP_001005549.1 Somatomedin_B 61..104 CDD:470596
Peptidase_C1A_CathepsinB 217..465 CDD:239111 66/241 (27%)
Blue background indicates that the domain is not in the aligned region.

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