DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsL3 and Ctsj

DIOPT Version :10

Sequence 1:NP_649608.1 Gene:CtsL3 / 40741 FlyBaseID:FBgn0037396 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_058817.1 Gene:Ctsj / 29174 RGDID:69241 Length:334 Species:Rattus norvegicus


Alignment Length:350 Identity:131/350 - (37%)
Similarity:193/350 - (55%) Gaps:38/350 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TPRLTVVHGLILLLLVELGLTAVS---DTEWDQYKAKYNKQYRN-RDKYHRALYEQRVLAVESHN 63
            ||.:.:|   ||...|..|..|..   |.||..:|.||.|.|.. .::..||::|:.:..::.||
  Rat     2 TPAVFLV---ILCFGVASGAPARDPNLDAEWQDWKTKYAKSYSPVEEELKRAVWEENLKMIQLHN 63

  Fly    64 QLYLQGKVAFKMGLNKFSDTDQRILFNYRSS-----IPAPLETSTNALTETVNYKRYDQITEGI- 122
            :....||..|.|.:|.|:||...   .:|.|     |||       |:|   |.....|::.|: 
  Rat    64 KENGLGKNGFTMEMNAFADTTGE---EFRKSLSDILIPA-------AVT---NPSAQKQVSIGLP 115

  Fly   123 ---DWRQYGYISPVGDQGTECLSCWAFSTSGVLEAHMAKKYGNLVPLSPKHLVDCVPYP-NNGCS 183
               |||:.||::||.:|| :|.|||||:..|.:|..|..|.|||.|||.::|:||.... ||||.
  Rat   116 NFKDWRKEGYVTPVRNQG-KCGSCWAFAAVGAIEGQMFSKTGNLTPLSVQNLLDCSKSEGNNGCR 179

  Fly   184 GGWVSVAFNYT-RDHGIATKESYPYEPVSGECLWKSDRSAGTLSGYVTLGNYDERELAEVVYNIG 247
            .|....||||. ::.|:..:.:||||...|.|.:.|:.::..::|:|.|.. :|..|...|.:||
  Rat   180 WGTAHQAFNYVLKNKGLEAEATYPYEGKDGPCRYHSENASANITGFVNLPP-NELYLWVAVASIG 243

  Fly   248 PVAVSIDHLHEEFDQYSGGVLSIPACRSKRQDLTHSVLLVGF---GTHRKWGDYWIIKNSYGTDW 309
            ||:.:||..|:.|..|||||...|.|.|  ..:.|:||:||:   |......:||:||||:|.:|
  Rat   244 PVSAAIDASHDSFRFYSGGVYHEPNCSS--YVVNHAVLVVGYGFEGNETDGNNYWLIKNSWGEEW 306

  Fly   310 GESGYLKLARNANNMCGVASLPQYP 334
            |.:|::|:|::.||.||:||...:|
  Rat   307 GINGFMKIAKDRNNHCGIASQASFP 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsL3NP_649608.1 Inhibitor_I29 30..85 CDD:462410 19/55 (35%)
Peptidase_C1A 120..334 CDD:239068 92/222 (41%)
CtsjNP_058817.1 Inhibitor_I29 29..87 CDD:214853 19/60 (32%)
Peptidase_C1 114..331 CDD:425470 91/220 (41%)

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