DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsL3 and Ctsh

DIOPT Version :10

Sequence 1:NP_649608.1 Gene:CtsL3 / 40741 FlyBaseID:FBgn0037396 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_037071.1 Gene:Ctsh / 25425 RGDID:2447 Length:333 Species:Rattus norvegicus


Alignment Length:322 Identity:111/322 - (34%)
Similarity:169/322 - (52%) Gaps:20/322 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 ELGLTAVSDTEWDQYKAKYNKQYRNRDKYHR-ALYEQRVLAVESHNQLYLQGKVAFKMGLNKFSD 82
            ||.:.|:....:..:..::.|.|.:|:..|| .::......:::||    |....||||||:|||
  Rat    22 ELTVNAIEKFHFTSWMKQHQKTYSSREYSHRLQVFANNWRKIQAHN----QRNHTFKMGLNQFSD 82

  Fly    83 TD-QRILFNYRSSIPAPLE-TSTNALTETVNYKRYDQITEGIDWRQYG-YISPVGDQGTECLSCW 144
            .. ..|...|..|.|.... |.:|.|..|..|      ...:|||:.| .:|||.:||. |.|||
  Rat    83 MSFAEIKHKYLWSEPQNCSATKSNYLRGTGPY------PSSMDWRKKGNVVSPVKNQGA-CGSCW 140

  Fly   145 AFSTSGVLEAHMAKKYGNLVPLSPKHLVDCVP-YPNNGCSGGWVSVAFNY-TRDHGIATKESYPY 207
            .|||:|.||:.:|...|.::.|:.:.||||.. :.|:||.||..|.||.| ..:.||..::||||
  Rat   141 TFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPY 205

  Fly   208 EPVSGECLWKSDRSAGTLSGYVTLGNYDERELAEVVYNIGPVAVSIDHLHEEFDQYSGGVLSIPA 272
            ...:|:|.:..:::...:...|.:...||..:.|.|....||:.:.: :.|:|..|..||.|..:
  Rat   206 IGKNGQCKFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFE-VTEDFMMYKSGVYSSNS 269

  Fly   273 CRSKRQDLTHSVLLVGFGTHRKWGDYWIIKNSYGTDWGESGYLKLARNANNMCGVASLPQYP 334
            |......:.|:||.||:| .:....|||:|||:|::||.:||..:.| ..||||:|:...||
  Rat   270 CHKTPDKVNHAVLAVGYG-EQNGLLYWIVKNSWGSNWGNNGYFLIER-GKNMCGLAACASYP 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsL3NP_649608.1 Inhibitor_I29 30..85 CDD:462410 17/56 (30%)
Peptidase_C1A 120..334 CDD:239068 80/216 (37%)
CtshNP_037071.1 Inhibitor_I29 33..88 CDD:462410 17/58 (29%)
Peptidase_C1A 115..329 CDD:239068 80/217 (37%)

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