DRSC/TRiP Functional Genomics Resources

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Protein Alignment CtsL3 and Ctsq

DIOPT Version :10

Sequence 1:NP_649608.1 Gene:CtsL3 / 40741 FlyBaseID:FBgn0037396 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_640355.1 Gene:Ctsq / 246147 RGDID:631421 Length:343 Species:Rattus norvegicus


Alignment Length:355 Identity:123/355 - (34%)
Similarity:184/355 - (51%) Gaps:36/355 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TPRLTVVHGLILLLLVELGLTAVS---DTEWDQYKAKYNKQYRNRDK-YHRALYEQRVLAVESHN 63
            ||.:.:|   ||.|.|..|.:|:.   |.:|.::|.||.|.|...:: ..|.::|:.|..:|.||
  Rat     2 TPAVFLV---ILCLGVVPGASALDLSLDVQWQEWKIKYEKLYSPEEEVLKRVVWEENVKKIELHN 63

  Fly    64 QLYLQGKVAFKMGLNKFSD-TDQRILFNYRSSI---PAPLETSTNALTETV---------NYKRY 115
            :....||..:.|.:|.|:| ||:    .::..|   ..|:..:...|.:..         |::  
  Rat    64 RENSLGKNTYTMEINDFADMTDE----EFKDMIIGFQLPVHNTEKRLWKRALGSFFPNSWNWR-- 122

  Fly   116 DQITEGIDWRQYGYISPVGDQGTECLSCWAFSTSGVLEAHMAKKYGNLVPLSPKHLVDC-VPYPN 179
            |.:.:.:|||..||::.|..|| .|.|||||..:|.:|..|.||.|.|:|||.::|:|| .|..|
  Rat   123 DALPKFVDWRNEGYVTRVRKQG-GCSSCWAFPVTGAIEGQMFKKTGKLIPLSVQNLIDCSKPQGN 186

  Fly   180 NGCSGGWVSVAFNYT-RDHGIATKESYPYEPVSGECLWKSDRSAGTLSGYVTLGNYDERELAEVV 243
            .||..|....||.|. .:.|:..:.:||||...|.|.:....|:..::|:|.|.. .|..|.:.|
  Rat   187 RGCLWGNTYNAFQYVLHNGGLEAEATYPYERKEGVCRYNPKNSSAKITGFVVLPE-SEDVLMDAV 250

  Fly   244 YNIGPVAVSIDHLHEEFDQYSGGVLSIPACRSKRQDLTHSVLLVGF---GTHRKWGDYWIIKNSY 305
            ...||:|..:..:...|..|..||...|.|.|.   :.|:||:||:   |......:||:||||:
  Rat   251 ATKGPIATGVHVISSSFRFYQKGVYHEPKCSSY---VNHAVLVVGYGFEGNETDGNNYWLIKNSW 312

  Fly   306 GTDWGESGYLKLARNANNMCGVASLPQYPT 335
            |..||..||:|:|::.||.|.:|||.||||
  Rat   313 GKRWGLRGYMKIAKDRNNHCAIASLAQYPT 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtsL3NP_649608.1 Inhibitor_I29 30..85 CDD:462410 19/56 (34%)
Peptidase_C1A 120..334 CDD:239068 85/218 (39%)
CtsqNP_640355.1 Inhibitor_I29 29..87 CDD:214853 20/61 (33%)
Peptidase_C1A 126..341 CDD:239068 85/219 (39%)

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