DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10280 and mep1ba

DIOPT Version :10

Sequence 1:NP_001246942.1 Gene:CG10280 / 40740 FlyBaseID:FBgn0037395 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_001070089.2 Gene:mep1ba / 100151009 ZFINID:ZDB-GENE-041014-209 Length:677 Species:Danio rerio


Alignment Length:312 Identity:93/312 - (29%)
Similarity:147/312 - (47%) Gaps:60/312 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 VALLVLSATTLSESAKLPVRQYPAGVDFFEHEFTSVAEVLKPLSDEYDPYGPDIGDDDLGIDDPE 115
            |.:|.|..::::...::.| .:...:|.||     :.||                   .|:|   
Zfish    14 VTVLCLPTSSVTGDTEIDV-DHGTDLDIFE-----INEV-------------------AGLD--- 50

  Fly   116 TMPRLFQGDIAIDPYTYITLRLGVNPMRHPKRLWPNGTIPFEISPRYANQERQAIIQAVKTFNSL 180
                |.:|||.|:........||      .:..||. |:|:.:........:..|::|.:.:...
Zfish    51 ----LVEGDILIEEGESRNTILG------EQYRWPT-TVPYFLDNSLEINAKGVILKAFEQYRLK 104

  Fly   181 TCVHFVPYDGEVDDYLLIEPPLEGPQGCWSYVG-RRGGEQVVSLQRPDENSAHCFSSEGRIMHEL 244
            ||:.|.|::|| .:|:.:   .:| .||:|.|| |:.|:|.:|:      .::| .|.|.:.||.
Zfish   105 TCIDFKPWNGE-SNYIFV---FKG-SGCYSKVGNRQMGKQELSI------GSNC-DSLGTVEHEF 157

  Fly   245 MHAIGIYHEQSRADRDNFVKIHWDNIVPRFRKNFKLVSK-KKGKYAFDYDYNSVMHYGEFYFSKR 308
            :||:|::|||||:|||::|.|.||.|......||.|..: :.......|||:|||||.:..|:  
Zfish   158 LHALGLWHEQSRSDRDDYVIIVWDQIQDGKEHNFNLYDETQSSSLGVPYDYSSVMHYSKTSFN-- 220

  Fly   309 KGEKPTMTPLQPGVR--IGQRKTISKIDCLKINELYGCLQGRRAKMYRSFCH 358
            ||.:||:....|...  ||||...|..|.||:|.||.|   ..:..:...||
Zfish   221 KGSEPTIVTKIPEFLNVIGQRMEFSDNDLLKLNRLYNC---TTSSTFLDSCH 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10280NP_001246942.1 ZnMc_astacin_like 151..342 CDD:239807 68/194 (35%)
mep1baNP_001070089.2 ZnMc_meprin 29..258 CDD:239809 87/281 (31%)
MAM 268..431 CDD:459878 2/2 (100%)
MATH_Meprin_Beta 430..599 CDD:239751
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.