DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rm62 and TDRD12

DIOPT Version :10

Sequence 1:NP_524243.2 Gene:Rm62 / 40739 FlyBaseID:FBgn0003261 Length:719 Species:Drosophila melanogaster
Sequence 2:NP_001424876.1 Gene:TDRD12 / 91646 HGNCID:25044 Length:1335 Species:Homo sapiens


Alignment Length:484 Identity:106/484 - (21%)
Similarity:205/484 - (42%) Gaps:68/484 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 SQDLPMRPVDFSNLAPFKKNFYQEHPNV-----ANRSPYEVQRYREEQEI-TVRGQVP------- 277
            |.:.|:|..:       ||.:.:::..|     .|..|.......:.|:: .::|..|       
Human   353 SNEKPLRLTE-------KKEYDEKNSCVKLLQFLNPDPLRADGISDLQQLQKLKGLQPPVVVLRN 410

  Fly   278 --NPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAI 340
              .|........|...:.|.::|..:..|:..::..||....|.:.|.|:...|...| |:||.:
Human   411 KIKPCLTIDSSPLSADLKKALQRNKFPGPSHTESYSWPPIARGCDVVVISHCESNPLL-YLLPVL 474

  Fly   341 VHINN---QQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCV--FGGAPKGGQMRD 400
            ..:..   .:.|...:||:|:::.|..:.||.|.::..|:..||...:..:  .|...:..:...
Human   475 TVLQTGACYKSLPSRNGPLAVIVCPGWKKAQFIFELLGEYSMSSRPLHPVLLTIGLHKEEAKNTK 539

  Fly   401 LQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPD------ 459
            |.|||::::.||..|:..|:..|....|..:|:|||.: :|.:....|:..|:...:.:      
Human   540 LPRGCDVIVTTPYSLLRLLACQSLLFLRLCHLILDEVE-VLFLEANEQMFAILDNFKKNIEVEER 603

  Fly   460 ----RQTLMWSATWPKEVKQLAEDFLGN-YIQINIGSLELSANH-NIRQVVDVCDEFSKEEKLKT 518
                .|.:.....|.|.::.|.::|:.: ||.|.  ::|.:|.: |::|||.:|.|..|...|..
Human   604 ESAPHQIVAVGVHWNKHIEHLIKEFMNDPYIVIT--AMEEAALYGNVQQVVHLCLECEKTSSLLQ 666

  Fly   519 LLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFR----SG 579
            .|..|...::   |.:||..:....:.:.:.:.|..:.|..:|.:...:.:: ||.:::    ||
Human   667 ALDFIPSQAQ---KTLIFTCSVAETEIVCKVVESSSIFCLKMHKEMIFNLQN-VLEQWKKKLSSG 727

  Fly   580 KSNILVATDVAARGLDVDGIKYVINFDYPQNSE----------DYIHRIGRTG----RSNTKGTS 630
            ...||..||.....|.:.....||:|.:|.:.:          |:.|  ...|    :.:.|..|
Human   728 SQIILALTDDCVPLLAITDATCVIHFSFPASPKVFGGRLYCMSDHFH--AEQGSPAEQGDKKAKS 790

  Fly   631 FAFFTKNNAKQAKALVDVLREANQEINPA 659
            ....|:.:|..|..::..|..|:.:: ||
Human   791 VLLLTEKDASHAVGVLRYLERADAKV-PA 818

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rm62NP_524243.2 DEAD-like_helicase_N 231..669 CDD:475120 104/479 (22%)
TDRD12NP_001424876.1 None

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