DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rm62 and Ddx59

DIOPT Version :10

Sequence 1:NP_524243.2 Gene:Rm62 / 40739 FlyBaseID:FBgn0003261 Length:719 Species:Drosophila melanogaster
Sequence 2:NP_080776.1 Gene:Ddx59 / 67997 MGIID:1915247 Length:619 Species:Mus musculus


Alignment Length:413 Identity:138/413 - (33%)
Similarity:231/413 - (55%) Gaps:19/413 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 YQEHPNVANRSPYEVQRYREEQEITVRGQ-VPNPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQ 310
            |:|||.:......:::..:::..|:|:|| |..||.||.....|:.:.:.:::.||:.||.||.|
Mouse   168 YKEHPFIVTLKEDQIETLKQQLGISVQGQDVARPIIDFEHCGFPETLNQNLKKSGYEVPTPIQMQ 232

  Fly   311 GWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQRGDGPIALVLAPTRELAQQIQQVAT 375
            ..|:.:.|.:.:..|.||||||..::||.|:...::...     |.||:|.||||||.||::.|.
Mouse   233 MIPVGLLGRDILASADTGSGKTAAFLLPVIIRAFSEDKT-----PSALILTPTRELAIQIERQAK 292

  Fly   376 EFGSS-SYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADR 439
            |..|. ..::...:.||.|...|:..|::..:::|||||||:|.:...|.:|.....:|:||||.
Mouse   293 ELMSGLPRMKTVLLVGGLPLPPQLYRLRQHVKVIIATPGRLLDIIKQSSVSLSGIKIVVVDEADT 357

  Fly   440 MLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVV 504
            ||.|||:.|:..::.....|.||::.|||.|..::||.:..|.|.::|..|...|.. .::||::
Mouse   358 MLKMGFQQQVLDVLEHTPGDCQTILVSATIPDSIEQLTDQLLHNPVRIITGDKNLPC-ASVRQII 421

  Fly   505 DVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSF-GVRCGAIHGDKSQSE 568
            ...::.:|::||..:|:| ....:.|  :::||:.|...|.|...::.. |:...:||.:|||.|
Mouse   422 LWVEDPAKKKKLFEILND-QKLFKPP--VLVFVDCKLGADLLSEAVQKITGLNSTSIHSEKSQVE 483

  Fly   569 RDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAF 633
            |..:|:....|...::|:|.|..||||:..:|.|:|||.|.:.::|:|::||.||....||:..|
Mouse   484 RRDILKGLLEGDYEVVVSTGVLGRGLDLVNVKLVVNFDMPSSMDEYVHQVGRVGRLGQNGTAITF 548

  Fly   634 FTKNN-------AKQAKALVDVL 649
            ...|:       ||:.|....:|
Mouse   549 INNNSKRLFWDVAKRVKPTGSIL 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rm62NP_524243.2 DEAD-like_helicase_N 231..669 CDD:475120 138/413 (33%)
Ddx59NP_080776.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..101
PLN00206 70..593 CDD:215103 138/413 (33%)
Q motif 203..231 8/27 (30%)
DEAD box 353..356 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 583..603
Blue background indicates that the domain is not in the aligned region.

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