Sequence 1: | NP_524243.2 | Gene: | Rm62 / 40739 | FlyBaseID: | FBgn0003261 | Length: | 719 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001032894.2 | Gene: | ddx42 / 503932 | ZFINID: | ZDB-GENE-050706-53 | Length: | 908 | Species: | Danio rerio |
Alignment Length: | 768 | Identity: | 245/768 - (31%) |
---|---|---|---|
Similarity: | 361/768 - (47%) | Gaps: | 161/768 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 GWGNLLLISPRSGASSEKCITQRRHFLFSSASSSGTFASSSSLCTEQRQQFH--GSRRNRETILF 85
Fly 86 PSTYSSLQAQSQRAFRDSSKPDSDDYVDSIPKAEQRTRTRKSLFNDPDERTEEIKIEGVMAPHDR 150
Fly 151 DFGHSGRGGRGGDRGGDDRRGGGGGGNRFGGGGGGGDYH-------------------------- 189
Fly 190 -------GIRNGRVEKRRDDRGGGNRFGGGGGFGDRRGGGGGGSQD------------------- 228
Fly 229 ----LPMRPVDFSNL--APFKKNFYQEHPNVANRSPYEVQRYREEQEITVRGQV-PNPIQDFSEV 286
Fly 287 HLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQR 351
Fly 352 GDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLI 416
Fly 417 DFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFL 481
Fly 482 GNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNL 546
Fly 547 VRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNS 611
Fly 612 EDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA------RNSRYD 670
Fly 671 GGGGRSRYGGGGGGG---RFG--------GGGFKKGSLSNGRGFGGGGGGGGE 712 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rm62 | NP_524243.2 | PTZ00424 | 280..656 | CDD:185609 | 164/375 (44%) |
DEADc | 283..488 | CDD:238167 | 103/204 (50%) | ||
HELICc | 499..633 | CDD:238034 | 50/133 (38%) | ||
ddx42 | NP_001032894.2 | DEADc | 257..461 | CDD:238167 | 103/203 (51%) |
DEXDc | 270..476 | CDD:214692 | 105/206 (51%) | ||
HELICc | 472..603 | CDD:238034 | 50/133 (38%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D245118at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |