Protein Alignment Rm62 and ddx42

DIOPT Version :9

• Sequence 1: NP_524243.2
• Gene: Rm62 / 40739
• FlyBaseID: FBgn0003261
• Length: 719
• Species: Drosophila melanogaster
• Sequence 2: NP_001032894.2
• Gene: ddx42 / 503932
• ZFINID: ZDB-GENE-050706-53
• Length: 908
• Species: Danio rerio
• Alignment Length: 768
• Identity: 245/768 - (31%)
• Similarity: 361/768 - (47%)
• Gaps: 161/768 - (20%)

  Fly    23 GWGNLLLISPRSGASSEKCITQRRHFLFSSASSSGTFASSSSLCTEQRQQFH--GSRRNRETILF 85
            |:|...|   .:|...|..:.|:.|..|.....||.:..:     :|...|:  |::|
Zfish    15 GFGGFAL---ATGKKEEPHLPQKAHSSFGGTGPSGGYGKN-----QQLSSFYKIGTKR------- 64

  Fly    86 PSTYSSLQAQSQRAFRDSSKPDSDDYVDSIPKAEQRTRTRKSLFNDPDERTEEIKIEGVMAPHDR 150
                  .....:.|:.:..:.:|...:..||  .:.:.|||..
Zfish    65 ------ANFDEENAYFEDDEEESTADLPYIP--AENSPTRKQF---------------------- 99

  Fly   151 DFGHSGRGGRGGDRGGDDRRGGGGGGNRFGGGGGGGDYH-------------------------- 189
                               :.||      ||||||.|..
Zfish   100 -------------------QSGG------GGGGGGSDSEDDPLDAFMAEVEDQAAKDMKKLEEKE 139

  Fly   190 -------GIRNGRVEKRRDDRGGGNRFGGGGGFGDRRGGGGGGSQD------------------- 228
                   |||:...|:  ||:....|:..       .....|.:|:
Zfish   140 KEKKMAKGIRDDIEEE--DDQEAYFRYMA-------ENPTAGLTQEEEEEEVDYDSDGNPIAPTT 195

  Fly   229 ----LPMRPVDFSNL--APFKKNFYQEHPNVANRSPYEVQRYREEQEITVRGQV-PNPIQDFSEV 286
                :|:.|:|.|.:  :||:||||.||..:::.:..||...|.:..:.|.|.. |.|...|:..
Zfish   196 KKIIMPLPPIDHSEIDYSPFEKNFYNEHEEISSLTGAEVVELRRKLNLKVSGAAPPKPATSFAHF 260

  Fly   287 HLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQR 351
            ...:.:|.:||:..|..||.||.||.|||:||.:.:||||||||||..:|.|.:|||.:|:.|:.
Zfish   261 GFDEQLMHQIRKSEYTQPTPIQCQGVPIALSGRDAIGIAKTGSGKTAAFIWPILVHIMDQKELEP 325

  Fly   352 GDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLI 416
            |:||||:::.|||||.|||......||.:..:|:..|:||.....|.:.||.|.|||:.||||||
Zfish   326 GEGPIAVIVCPTRELCQQIHAECKRFGKAYGLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLI 390

  Fly   417 DFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFL 481
            |.:...:|:|:|.|:||.||||||.|||||.|:|.|.|.:|||||||::|||:.|::::||.|.|
Zfish   391 DHVKKKATSLQRVTFLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDIL 455

  Fly   482 GNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNL 546
            .:.|::..|.:. .||.:|.|:|:|..  |.::|...|...:.:.: |.|.:::||..|...:.|
Zfish   456 VDPIRVVQGDIG-EANEDITQIVEVLQ--SGQDKWGWLTRRLVEFT-SAGSVLVFVTKKANCEEL 516

  Fly   547 VRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNS 611
            ...:...|...|.:|||..||||:.|:.:|:.....:||||||||||||:..|:.|:|:|..::.
Zfish   517 ATNLIQEGYSLGLLHGDMDQSERNKVIADFKKKNLPVLVATDVAARGLDIPSIRTVVNYDVARDI 581

  Fly   612 EDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA------RNSRYD 670
            :.:.||||||||:..||.::...|..:...|..||..|..|||.::..|.:||      |.||:.
Zfish   582 DTHTHRIGRTGRAGEKGVAYTLLTTKDTSFAGDLVRNLEGANQSVSKDLLDLAMQNPWFRKSRFK 646

  Fly   671 GGGGRSRYGGGGGGG---RFG--------GGGFKKGSLSNGRGFGGGGGGGGE 712
            ||.|:....||||.|   |.|        .||....:|.|...|....|..|:
Zfish   647 GGKGKKINIGGGGLGYRERPGLGSECSERSGGSIAAALGNYETFKPSTGAMGD 699

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rm62	NP_524243.2	PTZ00424	280..656	CDD:185609	164/375 (44%)
		DEADc	283..488	CDD:238167	103/204 (50%)
		HELICc	499..633	CDD:238034	50/133 (38%)
ddx42	NP_001032894.2	DEADc	257..461	CDD:238167	103/203 (51%)
		DEXDc	270..476	CDD:214692	105/206 (51%)
		HELICc	472..603	CDD:238034	50/133 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D245118at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.920