Protein Alignment Rm62 and Rs1

DIOPT Version :9

• Sequence 1: NP_524243.2
• Gene: Rm62 / 40739
• FlyBaseID: FBgn0003261
• Length: 719
• Species: Drosophila melanogaster
• Sequence 2: NP_001286188.1
• Gene: Rs1 / 44087
• FlyBaseID: FBgn0021995
• Length: 782
• Species: Drosophila melanogaster
• Alignment Length: 473
• Identity: 156/473 - (32%)
• Similarity: 239/473 - (50%)
• Gaps: 43/473 - (9%)

  Fly   218 RRGG--------GGGGSQDLPMRPVDFSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRG 274
            :|||        ..|...||....:...||...:|...::....|.....|.:..:.:...||
  Fly    88 KRGGAEAVAAEQSDGSEIDLSEDELKHDNLRLREKKESKKKKKKAGEEDEEDEGEKMQFADTV-- 150

  Fly   275 QVPNPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPA 339
            :....|..|.:::|...:|:.|...||..||.|||...|:|:.|.:..|.|.||:|||..|:||.
  Fly   151 EANEQITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTAAYMLPT 215

  Fly   340 IVHINNQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRG 404
            :..: ..:||........|||.|||||..|:.||..:....:.:......||.....|...|::.
  Fly   216 LERL-LYRPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQFTTIDVGLAIGGLDVKAQEAVLRQN 279

  Fly   405 CEIVIATPGRLIDFL-SAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSAT 468
            .:|||||||||||.: :..|..|.....|:|||||||||..|..|:::|::.....|||:::|||
  Fly   280 PDIVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDEYFAEQMKEIINSCCKTRQTMLFSAT 344

  Fly   469 WPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEF-----SKEEKLKTLLSDI----- 523
            ..::||.||...|...|::.:.:.:..| .|:||      ||     .||...:.:|:.:
  Fly   345 MSEQVKDLAAVSLDKPIKVFVNNNQQVA-FNLRQ------EFIRIREDKEGDREPILASLICRTF 402

  Fly   524 YDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATD 588
            :|      ..::||:||::...|...:...|||.|.:||:.:|.:|...|::|:..:.::|:|||
  Fly   403 HD------HCMVFVQTKKQAHRLHILLGLLGVRAGELHGNLTQQQRLESLKKFKEEQIDVLIATD 461

  Fly   589 VAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREA- 652
            |||||||:.|:|.||||..|..:|.||||:|||.|:...|.|.:.   ...|:.|.:.|:::.|
  Fly   462 VAARGLDIVGVKTVINFVMPITTEHYIHRVGRTARAGRAGISVSL---AGEKERKIVKDIIKNAE 523

  Fly   653 ----NQEINPALENLARN 666
                |:.|.|.:....||
  Fly   524 STIKNRIIPPEIIEKYRN 541

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rm62	NP_524243.2	PTZ00424	280..656	CDD:185609	139/391 (36%)
		DEADc	283..488	CDD:238167	79/205 (39%)
		HELICc	499..633	CDD:238034	53/143 (37%)
Rs1	NP_001286188.1	PTZ00424	148..537	CDD:185609	143/407 (35%)
		DEADc	159..364	CDD:238167	79/205 (39%)
		Helicase_C	393..498	CDD:278689	44/110 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45451703
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840