DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rm62 and CG9630

DIOPT Version :9

Sequence 1:NP_524243.2 Gene:Rm62 / 40739 FlyBaseID:FBgn0003261 Length:719 Species:Drosophila melanogaster
Sequence 2:NP_649777.1 Gene:CG9630 / 40974 FlyBaseID:FBgn0037561 Length:613 Species:Drosophila melanogaster


Alignment Length:439 Identity:130/439 - (29%)
Similarity:206/439 - (46%) Gaps:82/439 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   288 LPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQRG 352
            |.|.|::.::..|::..|.:|....|:.::..:....|.|||||||.:::|.:      :.|||.
  Fly    14 LSDAVLQVVQSFGFQQMTPVQTAAIPLLLARKDVSAEAVTGSGKTLAFLVPML------EILQRR 72

  Fly   353 D-----GPI---ALVLAPTRELAQQIQQVATEF---GSSSYVRNTCVFGGAPKGGQMRDLQR--G 404
            .     ||.   |||::||||||:||.:|..:|   ....::....:.||......:..|:|  .
  Fly    73 HKETPWGPKEIGALVISPTRELARQISEVLAQFLEHEDLEHLNQQLIVGGNSIEEDIATLRRETP 137

  Fly   405 CEIVIATPGRLIDFLSAGSTNL------KRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTL 463
            | |::.|||||.|.......:|      |...:||||||||:||:||:..:..|:..:...|:|.
  Fly   138 C-ILVCTPGRLEDLFQRKGDDLNLAAQVKSLEFLVLDEADRLLDLGFKTSVNNILGYLPRQRRTG 201

  Fly   464 MWSATWPKEVKQLAEDFLGNYIQINI---GSLELSAN-HNIRQVVDVCDEFSKEEKLKTLLSDIY 524
            ::|||...||..|....|.|.:.:::   .|:...|. .|..::|:      .|.|...||..:.
  Fly   202 LFSATQTTEVTDLIRAGLRNPVLVSVKEKASVNTPARLQNFYRIVE------PELKFVALLEFLS 260

  Fly   525 DTSESPGKIIIFVET----------------KRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVL 573
            ..:...||:::|..|                ||.|         .|     ||| |.:::|..|:
  Fly   261 SPATVIGKVMVFFPTCACVEYWAEALPPLLPKRTV---------LG-----IHG-KMKNKRANVV 310

  Fly   574 REFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAF----- 633
            .:||:....:|:.|||.||||||..|::|:.:|.|..:..::||:|||.|...:|.:..|     
  Fly   311 EKFRNTPQAVLLCTDVLARGLDVPEIEWVVQWDPPSTASSFVHRVGRTARQGNEGNALVFLLPSE 375

  Fly   634 -----FTKNNAK--QAKALVDVLREANQE---INPALENLARNSRYDGG 672
                 |.|.|.|  ..|.|.:...:|::|   :...|:.|.|....|.|
  Fly   376 DAYVHFLKINQKVELTKLLTEEAEDADREKKKLPAVLDQLHRLQAADKG 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rm62NP_524243.2 PTZ00424 280..656 CDD:185609 125/421 (30%)
DEADc 283..488 CDD:238167 71/218 (33%)
HELICc 499..633 CDD:238034 43/149 (29%)
CG9630NP_649777.1 DEADc 6..226 CDD:238167 71/218 (33%)
DEXDc 22..232 CDD:214692 68/216 (31%)
HELICc 239..370 CDD:238034 43/151 (28%)
DUF4217 411..470 CDD:290667 5/14 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451674
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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