Protein Alignment Rm62 and abs

DIOPT Version :10

• Sequence 1: NP_524243.2
• Gene: Rm62 / 40739
• FlyBaseID: FBgn0003261
• Length: 719
• Species: Drosophila melanogaster
• Sequence 2: NP_524220.1
• Gene: abs / 40530
• FlyBaseID: FBgn0015331
• Length: 619
• Species: Drosophila melanogaster
• Alignment Length: 471
• Identity: 174/471 - (36%)
• Similarity: 252/471 - (53%)
• Gaps: 35/471 - (7%)

  Fly   239 LAPFKKNFYQEHP---------NVANRSPYEVQRYREEQEITVRGQVPN-PIQDFSEVHLPDYVM 293
            :|...|....|.|         .:...|..|.:..|.|..|.|.|:.|: ||:.|.|:..|..::
  Fly   125 VAELAKGIQYEQPIKTAWKPPRYIREMSEEEREAVRHELRILVEGETPSPPIRSFREMKFPKGIL 189

  Fly   294 KEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQ---PLQRGDGP 355
            ..:..:|.|.||.||.||.|..::|.:.:|||.|||||||.::||.|:....|:   |.:|.:||
  Fly   190 NGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERNEGP 254

  Fly   356 IALVLAPTRELAQQIQQVATEFG------SSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGR 414
            ..|::.|:||||:|..::...:.      ....:|:....||.|....:..:.||..||:|||||
  Fly   255 YGLIICPSRELAKQTHEIIQHYSKHLQACGMPEIRSCLAMGGLPVSEALDVISRGVHIVVATPGR 319

  Fly   415 LIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAED 479
            |:|.|......|..|.||.:||||||:|||||..:|.|.|..:..||||::|||.||:::..|..
  Fly   320 LMDMLDKKILTLDMCRYLCMDEADRMIDMGFEEDVRTIFSFFKGQRQTLLFSATMPKKIQNFARS 384

  Fly   480 FLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVD 544
            .|...:.||:|... :|:.|:.|.|    |:.|:|.....|.|....:..|  ::||.|.|:.||
  Fly   385 ALVKPVTINVGRAG-AASMNVTQQV----EYVKQEAKVVYLLDCLQKTAPP--VLIFAEKKQDVD 442

  Fly   545 NLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQ 609
            .:..::...||...||||.|.|.||...:..:|.||.::|||||||::|||...:::|||:|.|.
  Fly   443 CIHEYLLLKGVEAVAIHGGKDQEERSRAVDAYRVGKKDVLVATDVASKGLDFPNVQHVINYDMPD 507

  Fly   610 NSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVD---VLREANQEINPALENLARNSRYD- 670
            :.|:|:|||||||||||||.:....  |...:...|:|   :|.|..||:...|:.||..:.:.
  Fly   508 DIENYVHRIGRTGRSNTKGLATTLI--NKTTEQSVLLDLKHLLIEGKQEVPDFLDELAPETEHQH 570

  Fly   671 ---GGGGRSRYGGGGG 683
               |......|.||.|
  Fly   571 LDLGDSHGCTYCGGLG 586

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rm62	NP_524243.2	DEAD-like_helicase_N	231..669	CDD:475120	169/451 (37%)
abs	NP_524220.1	DEADc_DDX41	188..393	CDD:350709	80/204 (39%)
		SF2_C_DEAD	404..532	CDD:350174	57/133 (43%)