Protein Alignment Rm62 and Gem3

DIOPT Version :9

• Sequence 1: NP_524243.2
• Gene: Rm62 / 40739
• FlyBaseID: FBgn0003261
• Length: 719
• Species: Drosophila melanogaster
• Sequence 2: NP_001261678.1
• Gene: Gem3 / 39195
• FlyBaseID: FBgn0011802
• Length: 1028
• Species: Drosophila melanogaster
• Alignment Length: 412
• Identity: 120/412 - (29%)
• Similarity: 200/412 - (48%)
• Gaps: 47/412 - (11%)

  Fly   266 EEQEITVRGQVPNPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSG 330
            ||:...|   .|..::.|.|:.|...::..::|..:..||.|||...|:|::..:.:..:|:|:|
  Fly    13 EERSSDV---APGQVKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLIIQSKSGTG 74

  Fly   331 KTLGYILPAIVHIN---NQQPLQRGDGPIALVLAPTRELAQQIQQV-------ATEFGSSSYVRN 385
            |||.|::..:...|   ||        |.|:::.||||||.|:|..       ..:|..|:::..
  Fly    75 KTLIYVIAVVQSFNPNINQ--------PHAMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGG 131

  Fly   386 TCVFGGAPKGGQMRDLQRGCE--IVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLD-MGFEP 447
            |.|         .:|.:|..|  ::|.|||||:........::.:...|||||||::.. ...:.
  Fly   132 TDV---------AKDRKRMNESRVIIGTPGRLLHLYENRVFDVSKLRLLVLDEADQLYQTKSLQH 187

  Fly   448 QIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFS- 511
            .:.|::..:..:||.:..|||:.:.:.:.....:...:.|: .|...:....|||.|....:.:
  Fly   188 TVSKLIEAMPKNRQIIACSATYDQNLDERLAKVMDKPMLIS-NSERATVLLGIRQFVYELPQQNN 251

  Fly   512 --KEEKLK-TLLSDIYDTSESP-GKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFV 572
              :|.:|| .:|..|:  ::.| .:.|||..::.|.|:...::.:.|:.|..|.|...||||..|
  Fly   252 SVEEMRLKLQILGQIF--NQLPYEQAIIFASSQMRADSYKNYLTASGIDCHLISGAMEQSERLHV 314

  Fly   573 LREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKN 637
            ...:|:....||||||:.|||:|......|||.|.||:...|:|||||.||..:||.:..|....
  Fly   315 FEGYRNFTMRILVATDLMARGVDSPHANLVINIDPPQDHVTYLHRIGRAGRFGSKGIAITFIASK 379

  Fly   638 NAKQAKALVDVLREANQEINPA 659
            ...|.      .||.:::|..|
  Fly   380 KESQR------FREMSKKIATA 395

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rm62	NP_524243.2	PTZ00424	280..656	CDD:185609	114/393 (29%)
		DEADc	283..488	CDD:238167	57/217 (26%)
		HELICc	499..633	CDD:238034	51/138 (37%)
Gem3	NP_001261678.1	SrmB	24..541	CDD:223587	116/398 (29%)
		P-loop_NTPase	27..228	CDD:304359	57/217 (26%)
		Helicase_C	259..367	CDD:278689	43/109 (39%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45451716
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR47958
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.940