Protein Alignment Rm62 and CG9143

DIOPT Version :10

• Sequence 1: NP_524243.2
• Gene: Rm62 / 40739
• FlyBaseID: FBgn0003261
• Length: 719
• Species: Drosophila melanogaster
• Sequence 2: NP_611467.1
• Gene: CG9143 / 37296
• FlyBaseID: FBgn0287774
• Length: 813
• Species: Drosophila melanogaster
• Alignment Length: 517
• Identity: 144/517 - (27%)
• Similarity: 227/517 - (43%)
• Gaps: 131/517 - (25%)

  Fly   266 EEQEITVRGQVPN--PI-----QDFSE---VHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSG-S 319
            ::||.|.. :.|.  ||     :|.|.   :.:|..:::.:..||:|.||.|||...|.|:.| .
  Fly   191 DQQESTDE-EAPELVPISTGEAEDMSAWNGLGVPASILRALGEQGFKTPTQIQALTLPAAIHGKK 254

  Fly   320 NFVGIAKTGSGKTLGYILPAIV------------------HINNQQP------------------ 348
            :.:|.|:|||||||.:.:|.:.                  .:..|||
  Fly   255 DILGAAETGSGKTLAFGIPMLAGIMELKQRNIRSGIRKAPKVKGQQPEPAADEHELTPPPEELDH 319

  Fly   349 --------------LQRGDGPI-ALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQM 398
                          .||...|: .|||.||||||.|::.........:.:|...:|||.....|.
  Fly   320 VSGASDEESDAEEQAQRVQTPLYGLVLTPTRELAVQVKNHLVAAAKYTGIRVAAIFGGLAVAKQE 384

  Fly   399 RDLQRGCEIVIATPGRLIDFLSAGSTNLKR---CTYLVLDEADRMLDMGFEPQIRKIVSQIRPD- 459
            |.|::..:||:||||||.:..:.|:.:|.:   .::||:||.|||::.|...::|.::..:..|
  Fly   385 RVLRQCPDIVVATPGRLWELYAQGNRHLGKIEDVSFLVIDETDRMVEKGHFEELRSLLKVLNSDE 449

  Fly   460 -----RQTLMWSATW------------------PKEVKQLAEDFLGNYIQINIGSLELSANHNIR 501
                 ||..::|||.                  ||.|||..:..:.:.|:      ||..:.  .
  Fly   450 QKKHQRQNFVYSATLTLVHDLPDHMQKRNVGKRPKFVKQTVDQKIESLIE------ELGISQ--P 506

  Fly   502 QVVDVCDEFSKEEKLKTLLSD-------------IYDTSESPGKIIIFVETKRRVDNLVRFIRSF 553
            ::||:.   |.::..:||...             .|.....||:.|:|..:   :|.:.|....|
  Fly   507 KIVDIT---SSQQTAQTLTESRLLCPIDHKDYHLYYFIQRHPGRTIVFCNS---IDCVKRLATLF 565

  Fly   554 G-VRCG--AIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYI 615
            | :.|.  .:|.:..|.:|...|..||...:.:|:||||||||||:..:::||::..|:.||:|:
  Fly   566 GLLDCNPLPLHANMIQKQRLKNLERFRDSPTGLLIATDVAARGLDIPNVEHVIHYQVPRTSENYV 630

  Fly   616 HRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVL-REANQEINPALE----------NLARN 666
            ||.|||.|:|..|.:..|......|....|...| |..:..:.|.||          ||||:
  Fly   631 HRSGRTARANKHGITVMFMEPGEVKSYVKLYKTLERTEDLPLFPILERFMGAVRERVNLARD 692

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rm62	NP_524243.2	DEAD-like_helicase_N	231..669	CDD:475120	144/517 (28%)
CG9143	NP_611467.1	DEADc_DDX24	226..510	CDD:350704	77/291 (26%)
		SF2_C_DEAD	521..648	CDD:350174	42/129 (33%)