Protein Alignment Rm62 and pths

DIOPT Version :10

• Sequence 1: NP_524243.2
• Gene: Rm62 / 40739
• FlyBaseID: FBgn0003261
• Length: 719
• Species: Drosophila melanogaster
• Sequence 2: NP_610090.1
• Gene: pths / 35379
• FlyBaseID: FBgn0032919
• Length: 507
• Species: Drosophila melanogaster
• Alignment Length: 476
• Identity: 153/476 - (32%)
• Similarity: 235/476 - (49%)
• Gaps: 75/476 - (15%)

  Fly   266 EEQEITVRGQVPNPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSG 330
            |||::|           :.::.|.:.:.:......:|||:.||.:..|:|:.|.:.:|:|:||||
  Fly    57 EEQKLT-----------WKDLGLNEALCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSG 110

  Fly   331 KTLGYILPAIVHINNQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKG 395
            ||..:.|| |:|...:.| ||   ..||||.||||||.||.:.....||...::...|.||....
  Fly   111 KTGAFALP-ILHALLENP-QR---YFALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMV 170

  Fly   396 GQMRDLQRGCEIVIATPGRLIDFL-SAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPD 459
            .|...|.:...|:|||||||:|.| :....|||...|||:|||||:|:|.||.::.||:..:..:
  Fly   171 AQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKILKVLPRE 235

  Fly   460 RQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEF-------SKEEKLK 517
            |:|.::|||..|:||:|....|.:.:::.:.        |..|.|:...:.       .|:..|.
  Fly   236 RRTFLFSATMTKKVKKLQRASLKDPVKVEVS--------NKYQTVEQLQQSYLFIPVKYKDVYLV 292

  Fly   518 TLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSN 582
            .:|:::...|     .:||..|..........:|:.|:....:||..||::|...|.:|::...:
  Fly   293 HILNELAGNS-----FMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRLAALNKFKAKNRS 352

  Fly   583 ILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFT------------ 635
            ||::||||:||||:..:..|:|||.|.:|:|||||:|||.|:...|.:....:
  Fly   353 ILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITLVSQYDIELYQRIEH 417

  Fly   636 ---------KNNAKQAKALVDVLREANQEINPALENL--ARNSRYDGG----------GGRSR-- 677
                     |....:..||.:.:.||.:.....|::|  .|.....||          |.|.|
  Fly   418 LLGKQLTLYKCEEDEVMALQERVAEAQRTAKLELKDLEDTRGGHKRGGDTHDDSENFTGARKRMK 482

  Fly   678 -YGGGGGGGR--FGGGGFKKG 695
             .||.|||||  ||...:.||
  Fly   483 PMGGTGGGGRKSFGKKNWSKG 503

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rm62	NP_524243.2	DEAD-like_helicase_N	231..669	CDD:475120	137/433 (32%)
pths	NP_610090.1	SrmB	62..480	CDD:440279	138/446 (31%)