Protein Alignment Rm62 and eIF4A

DIOPT Version :9

• Sequence 1: NP_524243.2
• Gene: Rm62 / 40739
• FlyBaseID: FBgn0003261
• Length: 719
• Species: Drosophila melanogaster
• Sequence 2: NP_001245907.1
• Gene: eIF4A / 33835
• FlyBaseID: FBgn0001942
• Length: 403
• Species: Drosophila melanogaster
• Alignment Length: 392
• Identity: 137/392 - (34%)
• Similarity: 217/392 - (55%)
• Gaps: 31/392 - (7%)

  Fly   282 DFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQ 346
            :|.:::|.:.:::.|...|::.|:|||.:.....:.|.:.:..|::|:|||..:.: ||
  Fly    31 NFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSGTGKTATFSI-AI------ 88

  Fly   347 QPLQRGDGPI----ALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEI 407
              ||:.|..|    ||:||||||||.|||:|....|....|.:....||.......|.|:.||.:
  Fly    89 --LQQIDTSIRECQALILAPTRELATQIQRVVMALGEYMKVHSHACIGGTNVREDARILESGCHV 151

  Fly   408 VIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKE 472
            |:.||||:.|.::......:.....||||||.||..||:.||:.:...:.||.|.::.|||.|.:
  Fly   152 VVGTPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDVFKMLPPDVQVILLSATMPPD 216

  Fly   473 VKQLAEDFLGNYIQINIGSLELSANHNIRQ-VVDVCDEFSKEE--KLKTLLSDIYDTSESPGKII 534
            |.:::..|:.:.:.|.:...||:. ..|:| .|:|     |:|  ||.| |.|:|||. |..:.:
  Fly   217 VLEVSRCFMRDPVSILVKKEELTL-EGIKQFYVNV-----KQENWKLGT-LCDLYDTL-SITQSV 273

  Fly   535 IFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGI 599
            ||..|:|:||.|.:.:........|:|||..|.:|:.::::||||.|.:|:.||:.|||:||..:
  Fly   274 IFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGIDVQQV 338

  Fly   600 KYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 664
            ..|||:|.|.|.|:|||||||.||...||.:..|.|.::.:       :|::..|..:..:|.:.
  Fly   339 SLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFITDDDRR-------ILKDIEQFYHTTIEEMP 396

  Fly   665 RN 666
            .|
  Fly   397 AN 398

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rm62	NP_524243.2	PTZ00424	280..656	CDD:185609	135/380 (36%)
		DEADc	283..488	CDD:238167	69/208 (33%)
		HELICc	499..633	CDD:238034	59/136 (43%)
eIF4A	NP_001245907.1	PTZ00424	6..403	CDD:185609	137/392 (35%)
		DEADc	32..232	CDD:238167	69/208 (33%)
		Helicase_C	254..358	CDD:278689	46/105 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45451762
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840