DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rm62 and Dbp21E2

DIOPT Version :9

Sequence 1:NP_524243.2 Gene:Rm62 / 40739 FlyBaseID:FBgn0003261 Length:719 Species:Drosophila melanogaster
Sequence 2:NP_608544.1 Gene:Dbp21E2 / 33254 FlyBaseID:FBgn0086130 Length:536 Species:Drosophila melanogaster


Alignment Length:426 Identity:119/426 - (27%)
Similarity:202/426 - (47%) Gaps:48/426 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   271 TVRG----QVPNPIQDFSE---VHLPDYVMKEIRRQ-GYKAPTAIQAQGWPIAMSGSNFVGIAKT 327
            :|||    |....:.:|.|   :.:...:::.:|.: |.|..|.||.||.|:.....:.:..|:|
  Fly    91 SVRGEELQQEMQTVDEFLESTGMQIHPQLLENLRVELGIKLLTGIQKQGMPVVHGNEHCLIAAET 155

  Fly   328 GSGKTLGYILPAIVHINNQQPL--QRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFG 390
            |.|||:.|:||.:..:..::.:  ::.:.|..|:|.|.||||.||..|..:....:.::...:.|
  Fly   156 GCGKTITYLLPIVDKLLQKEVVTERKLNTPRVLILTPGRELATQIAGVTEKLTQGTNLKVQSLLG 220

  Fly   391 GAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIR----- 450
            |..|...|.......:|::||.|.|...::.|...:::..:|||||||.:||..|..::.     
  Fly   221 GNTKQLMMNPQFEEVDILVATLGALSKLVTTGIYRMEQVRHLVLDEADTLLDDTFTDKLSYFLRR 285

  Fly   451 ---KIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSL-ELSANHNIRQVVDVCDEF- 510
               .:|.:.....|.::.|||.|...:::....      |::.:: |:.:.|..|.:..|..:| 
  Fly   286 FPFHLVQKEDAGTQMILASATMPTNTREILHKV------IDVDTIREVVSPHLHRLMSHVTQKFL 344

  Fly   511 --SKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVL 573
              ||.::..||||.:.........:|:|.......|.:..|:.:.||.|..::||.....|....
  Fly   345 RLSKADRPATLLSLVKHDLAKRRPLIVFSNKSTTSDFVSIFLNNSGVNCLNLNGDMLMKIRLGRF 409

  Fly   574 REFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNN 638
            .:|::|..::|..|||.:||||....::|:|||:|.:..|||||.||.||.              
  Fly   410 EQFQNGHCDVLSTTDVGSRGLDTTRARHVVNFDFPLHVSDYIHRCGRIGRV-------------- 460

  Fly   639 AKQAKALVDVLREANQEIN--PALENLARNSRYDGG 672
            ....||||..|..:.:||:  ..:|:.||.    ||
  Fly   461 GNMDKALVTNLISSRREIDVVQRIEHAART----GG 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rm62NP_524243.2 PTZ00424 280..656 CDD:185609 108/393 (27%)
DEADc 283..488 CDD:238167 57/218 (26%)
HELICc 499..633 CDD:238034 43/136 (32%)
Dbp21E2NP_608544.1 P-loop_NTPase 113..314 CDD:304359 55/200 (28%)
DEXDc 126..330 CDD:214692 56/209 (27%)
HELICc 343..462 CDD:238034 41/132 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451658
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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