DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rm62 and DDX25

DIOPT Version :10

Sequence 1:NP_524243.2 Gene:Rm62 / 40739 FlyBaseID:FBgn0003261 Length:719 Species:Drosophila melanogaster
Sequence 2:NP_037396.3 Gene:DDX25 / 29118 HGNCID:18698 Length:483 Species:Homo sapiens


Alignment Length:484 Identity:129/484 - (26%)
Similarity:215/484 - (44%) Gaps:66/484 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 GGGGGSQDLPMRPVDFSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRGQVPN------- 278
            ||..|:.:.......||||:..:||.:.............:....|:.|..|.....|       
Human     7 GGDAGAAESERLNSHFSNLSQPRKNLWGIKSTAVRNIDGSINNINEDDEEDVVDLAANSLLNKLI 71

  Fly   279 -----------------------PIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWP--IAMSG 318
                                   .::.|.|:.|.:.::|.|...|:..|:.||....|  :|...
Human    72 HQSLVESSHRVEVLQKDPSSPLYSVKTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPP 136

  Fly   319 SNFVGIAKTGSGKTLGYILPAIVHINNQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSY- 382
            .|.:..:::|:|||..::|..:..:|..:..     |..|.||||.|||.|..:|..:.|.... 
Human   137 QNLIAQSQSGTGKTAAFVLAMLSRVNALELF-----PQCLCLAPTYELALQTGRVVEQMGKFCVD 196

  Fly   383 ------VRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDF-LSAGSTNLKRCTYLVLDEADRM 440
                  :|...:    |:|   .|:.:  :|:|.|||.::|: ......:|.:....||||||.|
Human   197 VQVMYAIRGNRI----PRG---TDITK--QIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVM 252

  Fly   441 LD-MGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVV 504
            :| .||.....:|...:..:.|.|::|||:...|...||..:.:...|.:...||:.| ||||..
Human   253 IDTQGFSDHSIRIQRALPSECQMLLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLN-NIRQYY 316

  Fly   505 DVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSER 569
            .:|:.  :::|.:. |.:||. |.:.|:.|||.:|:|....|...:...|.:...:.|:.:..:|
Human   317 VLCEH--RKDKYQA-LCNIYG-SITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQR 377

  Fly   570 DFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYP------QNSEDYIHRIGRTGRSNTKG 628
            ..:::.||.||..:|:.|:|.|||:||..:..|:|||.|      .:.|.|:||||||||...||
Human   378 ASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKG 442

  Fly   629 TSFAFFTKNNAKQAKALVDVLREANQEIN 657
            .:|.....:.......:.|....:.:::|
Human   443 LAFNMIEVDELPSLMKIQDHFNSSIKQLN 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rm62NP_524243.2 DEAD-like_helicase_N 231..669 CDD:475120 126/474 (27%)
DDX25NP_037396.3 Nuclear export signal. /evidence=ECO:0000250 61..74 1/12 (8%)
DEADc_DDX25 80..308 CDD:350806 62/241 (26%)
Q motif 97..125 8/27 (30%)
Nuclear localization signal. /evidence=ECO:0000250 100..114 4/13 (31%)
DEAD box 247..250 2/2 (100%)
SF2_C_DEAD 312..448 CDD:350174 49/139 (35%)

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