Protein Alignment Rm62 and vas

DIOPT Version :9

• Sequence 1: NP_524243.2
• Gene: Rm62 / 40739
• FlyBaseID: FBgn0003261
• Length: 719
• Species: Drosophila melanogaster
• Sequence 2: NP_001260458.1
• Gene: vas / 26067080
• FlyBaseID: FBgn0283442
• Length: 661
• Species: Drosophila melanogaster
• Alignment Length: 667
• Identity: 227/667 - (34%)
• Similarity: 326/667 - (48%)
• Gaps: 112/667 - (16%)

  Fly   108 SDDYVDSIPKAEQRTRTRKSLFNDPDERTEEIKIEGVMAPHDRDFGHSGRGGRGGDRGGDDR--- 169
            |||: |..|..:.| ..|...::|.::..:....|   |..|   |..|.||.||...|.:|
  Fly     2 SDDW-DDEPIVDTR-GARGGDWSDDEDTAKSFSGE---AEGD---GVGGSGGEGGGYQGGNRDVF 58

  Fly   170 ------RGGGGGGNRFGGGGGGGDYHGIRNGRVEKRRDDRGGGNRFGGG-----GGFGDRRGGGG 223
                  ||||.||.| ||...||.:||   ||.|..||.|||...|.||     ||.|..|||.|
  Fly    59 GRIGGGRGGGAGGYR-GGNRDGGGFHG---GRREGERDFRGGEGGFRGGQGGSRGGQGGSRGGQG 119

  Fly   224 G-----------------------------------GSQDLPMRPVD-----FSNLAPFKKNFYQ 248
            |                                   |..|...|..:     ....|..::|  :
  Fly   120 GFRGGEGGFRGRLYENEDGDERRGRLDREERGGERRGRLDREERGGERGERGDGGFARRRRN--E 182

  Fly   249 EHPNVANRSPYEVQRYRE---------------------------EQEITVR---GQVPNPIQDF 283
            :..|..|....:|:|.||                           ...|.|:   ..||.|||.|
  Fly   183 DDINNNNNIVEDVERKREFYIPPEPSNDAIEIFSSGIASGIHFSKYNNIPVKVTGSDVPQPIQHF 247

  Fly   284 SEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVH-INNQQ 347
            :...|.|.::..:.:.|||.||.||....|:..||.:.:..|:||||||..::||.:.. :.:..
  Fly   248 TSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSKLLEDPH 312

  Fly   348 PLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATP 412
            .|:.| .|..::::||||||.||...|.:|...||::...|:||.....|...:.|||.:|||||
  Fly   313 ELELG-RPQVVIVSPTRELAIQIFNEARKFAFESYLKIGIVYGGTSFRHQNECITRGCHVVIATP 376

  Fly   413 GRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQI--RPDRQTLMWSATWPKEVKQ 475
            |||:||:.......:...::|||||||||||||...:|:|::.:  ||:.||||:|||:|:|:::
  Fly   377 GRLLDFVDRTFITFEDTRFVVLDEADRMLDMGFSEDMRRIMTHVTMRPEHQTLMFSATFPEEIQR 441

  Fly   476 LAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETK 540
            :|.:||.||:.:.||.:. .|..:::|.:...::::|..||..:||:..|.:      |:|||||
  Fly   442 MAGEFLKNYVFVAIGIVG-GACSDVKQTIYEVNKYAKRSKLIEILSEQADGT------IVFVETK 499

  Fly   541 RRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINF 605
            |..|.|..|:........:||||:.||:|:..||:|::|...:|:||.||:||||:..||:|||:
  Fly   500 RGADFLASFLSEKEFPTTSIHGDRLQSQREQALRDFKNGSMKVLIATSVASRGLDIKNIKHVINY 564

  Fly   606 DYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKA-LVDVLREANQEINPALENLARNSRY 669
            |.|...:||:||||||||....|.:.:||.....:...| ||.:|..:.|.:...|.......
  Fly   565 DMPSKIDDYVHRIGRTGRVGNNGRATSFFDPEKDRAIAADLVKILEGSGQTVPDFLRTCGAGG-- 627

  Fly   670 DGGGGRSRYGGGGGGGR 686
            |||.....:||....||
  Fly   628 DGGYSNQNFGGVDVRGR 644

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rm62	NP_524243.2	PTZ00424	280..656	CDD:185609	152/379 (40%)
		DEADc	283..488	CDD:238167	85/207 (41%)
		HELICc	499..633	CDD:238034	55/133 (41%)
vas	NP_001260458.1	DEADc	247..454	CDD:238167	85/207 (41%)
		DEXDc	260..467	CDD:214692	85/208 (41%)
		Helicase_C	475..584	CDD:278689	53/114 (46%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45451604
Domainoid	1	1.000	102	1.000	Domainoid score	I343
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	280	1.000	Inparanoid score	I100
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		mtm9764
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR47958
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	6	5.990