DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rm62 and dbp2

DIOPT Version :9

Sequence 1:NP_524243.2 Gene:Rm62 / 40739 FlyBaseID:FBgn0003261 Length:719 Species:Drosophila melanogaster
Sequence 2:NP_596523.1 Gene:dbp2 / 2541383 PomBaseID:SPBP8B7.16c Length:550 Species:Schizosaccharomyces pombe


Alignment Length:580 Identity:303/580 - (52%)
Similarity:384/580 - (66%) Gaps:55/580 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 MAPHDRDFGHSGRGGRGGDRGGDDRRG--GGGGGNRFGGGGGGGDYHGIRNGRVEKRRDDRGGGN 207
            |:..|.::.    |...|...|.:.||  |||..|.:..|||                  |||  
pombe     1 MSYRDNEYS----GNYNGKEDGYNSRGRYGGGYRNNYSRGGG------------------RGG-- 41

  Fly   208 RFGGGGGFG-DRRGGG------GGGSQDLPMRPVDFSNLAPFKKNFYQEHPNVANRSPYEVQRYR 265
             |..|..:| |:||.|      .|...:|..:......|.||:|:||:||.||.|||..||..||
pombe    42 -FNDGASYGYDQRGQGRNFYESDGPGANLVKKDWKNETLIPFQKDFYKEHENVRNRSDAEVTEYR 105

  Fly   266 EEQEITVRG-QVPNPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGS 329
            :|:||.|.| .||.|:..|.|...|:||:||:::.|::|||.||.|.||:||||.:.|||:.|||
pombe   106 KEKEIVVHGLNVPKPVTTFEEAGFPNYVLKEVKQLGFEAPTPIQQQAWPMAMSGRDMVGISATGS 170

  Fly   330 GKTLGYILPAIVHINNQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPK 394
            ||||.|.||||||||.|..|..|||||.||||||||||.||||..|:||.||.:|||||:||.|:
pombe   171 GKTLSYCLPAIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQQECTKFGKSSRIRNTCVYGGVPR 235

  Fly   395 GGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPD 459
            |.|:|||.||.||.|||||||:|.|.:..|||:|.||||||||||||||||||||||||.|||||
pombe   236 GPQIRDLIRGVEICIATPGRLLDMLDSNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPD 300

  Fly   460 RQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKTLLSDIY 524
            |||:|:||||||||::||.|:|.:|||:.:|||:|:|:|||:|:|:|.|...|..:|...:.:: 
pombe   301 RQTVMFSATWPKEVQRLARDYLNDYIQVTVGSLDLAASHNIKQIVEVVDNADKRARLGKDIEEV- 364

  Fly   525 DTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDV 589
             ..:...|::||..|||..|::.||:|..|....||||||:|.|||:||.|||:|||.|:|||||
pombe   365 -LKDRDNKVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGKSPIMVATDV 428

  Fly   590 AARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQ 654
            |:||:||.||.:|.|:|:|.|:|||:||||||||:..|||::.:||.:|||||:.||.:|.||.|
pombe   429 ASRGIDVKGITHVFNYDFPGNTEDYVHRIGRTGRAGAKGTAYTYFTSDNAKQARELVSILSEAKQ 493

  Fly   655 EINPALENLARNSRYDGGGGRSRYGGGGGGGRFGGGGFKKGSLSNGRGFGGGGGGGGEGR 714
            :|:|.||.:|            ||..||.||.:..||:.:|      ||..|||.|...|
pombe   494 DIDPKLEEMA------------RYSSGGRGGNYRRGGYGRG------GFRRGGGYGNRNR 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rm62NP_524243.2 PTZ00424 280..656 CDD:185609 231/375 (62%)
DEADc 283..488 CDD:238167 143/204 (70%)
HELICc 499..633 CDD:238034 69/133 (52%)
dbp2NP_596523.1 PTZ00110 2..507 CDD:240273 288/543 (53%)
DEADc 124..329 CDD:238167 143/204 (70%)
HELICc 340..472 CDD:238034 69/133 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 255 1.000 Domainoid score I387
eggNOG 1 0.900 - - E2759_KOG0331
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 568 1.000 Inparanoid score I181
OMA 1 1.010 - - QHG53695
OrthoFinder 1 1.000 - - FOG0000439
OrthoInspector 1 1.000 - - otm47161
orthoMCL 1 0.900 - - OOG6_100364
Panther 1 1.100 - - O PTHR47958
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R290
SonicParanoid 1 1.000 - - X504
TreeFam 1 0.960 - -
1312.860

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