DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rm62 and F57B9.3

DIOPT Version :10

Sequence 1:NP_524243.2 Gene:Rm62 / 40739 FlyBaseID:FBgn0003261 Length:719 Species:Drosophila melanogaster
Sequence 2:NP_498514.2 Gene:F57B9.3 / 186440 WormBaseID:WBGene00018997 Length:394 Species:Caenorhabditis elegans


Alignment Length:375 Identity:109/375 - (29%)
Similarity:189/375 - (50%) Gaps:25/375 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   274 GQVPNPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILP 338
            |.....::.|.::.|.:.:::.|...|::.|:|||........:|.:....::.|||||:..::.
 Worm    20 GNYDEVVESFDDMELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLID 84

  Fly   339 AIVHINNQQP-LQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCV-FGGAPKGGQMRDL 401
            .:..|:.:.. ||      .::|||.|.:||:..:.....|.:..|..||: |....:..::   
 Worm    85 ILQGIDCEDAHLQ------VILLAPQRGMAQRAHEQLKSLGRNLNVNATCLGFDTTAENDKI--- 140

  Fly   402 QRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWS 466
               ..:::.||.   ||||...::..|....||||||.||..||:.||.::...:..|.|.::.|
 Worm   141 ---SHVLMGTPK---DFLSNIPSDTSRIKMFVLDEADEMLSKGFKDQIYEVFRSMPQDVQVVLLS 199

  Fly   467 ATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQ-VVDVCDEFSKEEKLKTLLSDIYDTSESP 530
            ||.|.||..:...|:.:.|:|.:...||:. ..||| .::|    .|:|.....|.|:..||...
 Worm   200 ATMPSEVLDVTNRFMRDPIRILVKKDELTL-EGIRQFYINV----QKDEWKFNCLCDLLKTSRET 259

  Fly   531 GKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLD 595
             :.:||..|:|||..|...:.|..::....||:...:||:.::::|.|..:.:||.||:.|||::
 Worm   260 -QALIFCNTRRRVTQLTEQLMSIPIKVSCFHGNMEHNEREDMVKDFNSRNTRVLVTTDLMARGMN 323

  Fly   596 VDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKAL 645
            :.. ..:||:|...|.|:|:.|.||.|...:||...:|||:|:....|.:
 Worm   324 IRK-SLIINYDVSGNMENYMLRNGRQGNFGSKGLPISFFTENDISDLKKI 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rm62NP_524243.2 DEAD-like_helicase_N 231..669 CDD:475120 109/375 (29%)
F57B9.3NP_498514.2 DEAD-like_helicase_N 19..391 CDD:475120 109/375 (29%)

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