Protein Alignment Rm62 and ddx-17

DIOPT Version :10

• Sequence 1: NP_524243.2
• Gene: Rm62 / 40739
• FlyBaseID: FBgn0003261
• Length: 719
• Species: Drosophila melanogaster
• Sequence 2: NP_001041134.1
• Gene: ddx-17 / 179897
• WormBaseID: WBGene00010260
• Length: 561
• Species: Caenorhabditis elegans
• Alignment Length: 571
• Identity: 313/571 - (54%)
• Similarity: 394/571 - (69%)
• Gaps: 24/571 - (4%)

  Fly   151 DFGHSGRGGRGGDRGGDDRRGGGGGGNRFGGGGGGGDYHGIRNGRVEKRRDDRGGGNRFGGGGGF 215
            |.|:.|....||..||..|.|.||||.    |||||.|.|.|.|..     ..|||..:||||..
 Worm     3 DRGYGGSRSYGGSSGGGSRGGYGGGGR----GGGGGGYSGGRGGGY-----GGGGGGGYGGGGYG 58

  Fly   216 GDRRGGGGGGSQDLP---MRPVDFS--NLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRGQ 275
            |..||||.|||....   :|.||:|  ||.|.:|:||.|:..|:.|..||:.::....::|:.|:
 Worm    59 GGGRGGGRGGSNGSAGGRLRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGR 123

  Fly   276 -VPNPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPA 339
             ||.|:.:|:|..||..: .|:....::.||.||:..|||||||.:.:.||||||||||.::|||
 Worm   124 GVPRPVFEFNEAPLPGQI-HELLYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPA 187

  Fly   340 IVHINNQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRG 404
            :|||..|...|||:||..|||.||||||||:|:|:.:|..|..::.||:||||.||.|.|||:||
 Worm   188 LVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERG 252

  Fly   405 CEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATW 469
            .:||:||||||:|||..|:||:|:|:|||||||||||||||||||:||:.||||||||||:||||
 Worm   253 VDIVVATPGRLLDFLDNGTTNMKKCSYLVLDEADRMLDMGFEPQIKKIIGQIRPDRQTLMFSATW 317

  Fly   470 PKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKTLLSDIYDTSESPGKII 534
            ||||:.||.||..:...:|:|||||:|||||.||||:.:|.:|:.||..||:.|.:..|.  |.|
 Worm   318 PKEVRALASDFQKDAAFLNVGSLELAANHNITQVVDILEEHAKQAKLMELLNHIMNQKEC--KTI 380

  Fly   535 IFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGI 599
            |||||||:.|.|.|.:|..|.....|||||:|.|||:||:||::||:.|::||||||||||||.|
 Worm   381 IFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWVLQEFKAGKTPIMLATDVAARGLDVDDI 445

  Fly   600 KYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 664
            |:|||:|||.|||||:|||||||||:.|||::.|||..||.:||.|:.||.||.|.:..||.::|
 Worm   446 KFVINYDYPNNSEDYVHRIGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQTVPQALRDMA 510

  Fly   665 RNSRYDGGGGRSRYGGGGGGGRFGGGGF----KKGSLSNGRGFGGGGGGGG 711
             |..|.|...|.||||||...|..||..    |:....|| |:|||.||||
 Worm   511 -NRSYGGSNSRGRYGGGGFQKRGYGGNDNFAPKRPRYDNG-GYGGGSGGGG 559

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rm62	NP_524243.2	DEAD-like_helicase_N	231..669	CDD:475120	253/440 (58%)
ddx-17	NP_001041134.1	DEAD-like_helicase_N	77..538	CDD:475120	265/464 (57%)