DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rm62 and LOC1275440

DIOPT Version :10

Sequence 1:NP_524243.2 Gene:Rm62 / 40739 FlyBaseID:FBgn0003261 Length:719 Species:Drosophila melanogaster
Sequence 2:XP_061509051.1 Gene:LOC1275440 / 1275440 VectorBaseID:AGAMI1_001780 Length:597 Species:Anopheles gambiae


Alignment Length:562 Identity:202/562 - (35%)
Similarity:300/562 - (53%) Gaps:59/562 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 DRDFGHSGRGGRGGDRGGDDRRGGGGGGNRFGGGGGGGDYHGIRNGRVEKRRDDRGGGNRFGGGG 213
            |.::..:..||.|   ||||..||||.|.|.|.|||.|...| |.||      |.|||   .|||
Mosquito    47 DNEYQSNDNGGYG---GGDDGYGGGGRGGRGGRGGGRGRGRG-RGGR------DGGGG---FGGG 98

  Fly   214 GFGDRRGGGGGGSQDLPMRPVDFSNLAPFKKNFYQEHPNVANRSPYEVQ--------------RY 264
            |:|||.|.||        ||....|..|.......:.|......|...:              .:
Mosquito    99 GYGDRNGDGG--------RPAYSGNSDPSMDQVKTDKPRELYIPPLPTEDESLIFGSGISSGINF 155

  Fly   265 REEQEITVRGQVPNP---IQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAK 326
            .:.:||.||....||   ::.|....|.:.||..:|:..|..||.||....||.::|.:.:..|:
Mosquito   156 DKFEEIQVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQ 220

  Fly   327 TGSGKTLGYILPAIVH-INNQQPLQ-RGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVF 389
            ||||||..::||.|.| ::.:..|: |...|..:::|||||||.||.....:|...:.::....:
Mosquito   221 TGSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKLKVCVSY 285

  Fly   390 GGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVS 454
            ||.....|::.::.||.:::||||||:||:..|....:...::|||||||||||||.|.|.|::.
Mosquito   286 GGTAVQHQLQLMRGGCHVLVATPGRLLDFIDRGYVTFENVNFVVLDEADRMLDMGFLPSIEKVMG 350

  Fly   455 QI----RPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEK 515
            ..    :..|||||:|||:|.|:::||..||.|||.:.:|.:. .|..::.|.:.:.::|.|.:|
Mosquito   351 HATMPEKQQRQTLMFSATFPAEIQELAGKFLHNYICVFVGIVG-GACADVEQTIHLVEKFKKRKK 414

  Fly   516 LKTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGK 580
            |:.:|:     ..:|...::||||||..|.|...:........:||||:.|.||:..|.:|:||:
Mosquito   415 LEEILN-----GGNPKGTLVFVETKRNADYLASLMSETQFPTTSIHGDRLQREREMALYDFKSGR 474

  Fly   581 SNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFF-TKNNAKQAKA 644
            .::|:||.|||||||:..:.:|:|:|.|::.:||:||||||||...||.:.:|: .:.:...|..
Mosquito   475 MDVLIATSVAARGLDIKNVNHVVNYDLPKSIDDYVHRIGRTGRVGNKGRATSFYDPEADRAMASD 539

  Fly   645 LVDVLREANQEINPALENLARNSRYDGGGGRSRYGGGGGGGR 686
            ||.:|.:|.|.:...|:        |.||..|..|....||:
Mosquito   540 LVKILTQAGQSVPDFLK--------DAGGSGSYMGSSQFGGK 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rm62NP_524243.2 DEAD-like_helicase_N 231..669 CDD:475120 158/461 (34%)
LOC1275440XP_061509051.1 None

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