DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rm62 and DDX19B

DIOPT Version :10

Sequence 1:NP_524243.2 Gene:Rm62 / 40739 FlyBaseID:FBgn0003261 Length:719 Species:Drosophila melanogaster
Sequence 2:NP_001350867.1 Gene:DDX19B / 11269 HGNCID:2742 Length:484 Species:Homo sapiens


Alignment Length:493 Identity:132/493 - (26%)
Similarity:223/493 - (45%) Gaps:74/493 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 GGGGGSQDLPMR------PV-DFSNL-------------APFKKNFYQEHPNVANRSPYEVQRYR 265
            |..|..||..:|      || |.|||             |..|.|...|..:...:.....|...
Human     3 GAAGRVQDRALRRFPITLPVGDLSNLHLKEEKIKPDTNGAVVKTNANAEKTDEEEKEDRAAQSLL 67

  Fly   266 EE----------QEITVRGQVPN----PIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAM 316
            .:          .::.|..:.||    .::.|.|:.|...:::.:...|:..|:.||....|:.:
Human    68 NKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPLML 132

  Fly   317 S--GSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGS 379
            :  ..|.:..:::|:|||..::|..:..:   :|..:  .|..|.|:||.|||.|..:|..:.| 
Human   133 AEPPQNLIAQSQSGTGKTAAFVLAMLSQV---EPANK--YPQCLCLSPTYELALQTGKVIEQMG- 191

  Fly   380 SSYVRNTCVFGGAPKGGQMRDLQRGC----EIVIATPGRLIDFLS-AGSTNLKRCTYLVLDEADR 439
            ..|......:  |.:|.:   |:||.    :|||.|||.::|:.| ....:.|:....||||||.
Human   192 KFYPELKLAY--AVRGNK---LERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADV 251

  Fly   440 ML-DMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFL--GNYIQINIGSLELSANHNIR 501
            |: ..|.:.|..:|...:..:.|.|::|||:...|.:.|:..:  .|.|::   ..|......|:
Human   252 MIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKL---KREEETLDTIK 313

  Fly   502 QVVDVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQ 566
            |...:|.  |::||.:. |.::|. :.:..:.:||..|::....|...:...|.:...:.|:...
Human   314 QYYVLCS--SRDEKFQA-LCNLYG-AITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMV 374

  Fly   567 SERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYP------QNSEDYIHRIGRTGRSN 625
            .:|..|:..||.||..:||.|:|.|||:||:.:..|||||.|      .::|.|:||||||||..
Human   375 EQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFG 439

  Fly   626 TKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENL 663
            .:|.:.      |...:|..:::|....:..|..:|.|
Human   440 KRGLAV------NMVDSKHSMNILNRIQEHFNKKIERL 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rm62NP_524243.2 DEAD-like_helicase_N 231..669 CDD:475120 128/483 (27%)
DDX19BNP_001350867.1 DEAD-like_helicase_N 80..308 CDD:475120 64/241 (27%)
SF2_C_DEAD 312..448 CDD:350174 47/145 (32%)

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