DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp83a and Obp56a

DIOPT Version :9

Sequence 1:NP_001287190.1 Gene:Obp83a / 40737 FlyBaseID:FBgn0011281 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_611442.1 Gene:Obp56a / 37264 FlyBaseID:FBgn0034468 Length:139 Species:Drosophila melanogaster


Alignment Length:144 Identity:38/144 - (26%)
Similarity:61/144 - (42%) Gaps:21/144 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 SVLLIALSLLSGALILPPAAAQRDENYPPPGILKMAKPFHDACVEKTGVTE-----AAIKEFSDG 92
            |..:||||.|...|.:..:....||.      ..:||...:.|.|:..:||     ...|:|:  
  Fly     3 SYFVIALSALFVTLAVGSSLNLSDEQ------KDLAKQHREQCAEEVKLTEEEKAKVNAKDFN-- 59

  Fly    93 EIHEDEKLKCYMNCFFHEIEVVDD---NGDVHLEKLFATVPLSMRDKLMEMSKGCVHPEGDTLCH 154
              :..|.:||:.||||.::..:.|   ...|.||||.|.:.   .:|.....:.|...:|:..|.
  Fly    60 --NPTENIKCFANCFFEKVGTLKDGELQESVVLEKLGALIG---EEKTKAALEKCRTIKGENKCD 119

  Fly   155 KAWWFHQCWKKADP 168
            .|...:.|::...|
  Fly   120 TASKLYDCFESFKP 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp83aNP_001287190.1 PBP_GOBP 64..166 CDD:279703 28/109 (26%)
Obp56aNP_611442.1 PBP_GOBP 24..128 CDD:279703 29/116 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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