DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp83a and Obp56f

DIOPT Version :9

Sequence 1:NP_001287190.1 Gene:Obp83a / 40737 FlyBaseID:FBgn0011281 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_725926.1 Gene:Obp56f / 246668 FlyBaseID:FBgn0043533 Length:125 Species:Drosophila melanogaster


Alignment Length:106 Identity:24/106 - (22%)
Similarity:46/106 - (43%) Gaps:17/106 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 ACVEK-TGVTEAAIKEFSDGEIHEDE-KLKCYMNCFFHEIEVVDDNGDVH-------LEKLFATV 129
            ||::: .|.|   |.|.:..:..||. :.||:.:|.. |::.|..|..:.       |||.:.  
  Fly    28 ACLKRQLGYT---ITENTKFDAKEDSLQSKCFYHCLL-EVKGVIANDAISSEQPRKVLEKKYG-- 86

  Fly   130 PLSMRDKLMEMSKGCVHPEGDTLCHKAWWFHQCWKKADPKH 170
             ::..|:|.:..:.|...:....|...:...:|::.. .||
  Fly    87 -ITDTDELEKAEEKCHSIKASGKCELGYEILKCYQSI-TKH 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp83aNP_001287190.1 PBP_GOBP 64..166 CDD:279703 22/100 (22%)
Obp56fNP_725926.1 PBP_GOBP <52..120 CDD:279703 14/71 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11857
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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