DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2017 and GTPBP1

DIOPT Version :9

Sequence 1:NP_649603.3 Gene:CG2017 / 40733 FlyBaseID:FBgn0037391 Length:643 Species:Drosophila melanogaster
Sequence 2:XP_016884588.1 Gene:GTPBP1 / 9567 HGNCID:4669 Length:734 Species:Homo sapiens


Alignment Length:608 Identity:242/608 - (39%)
Similarity:350/608 - (57%) Gaps:59/608 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 FEEEPELNGNSSGGGSSS---SDYETDANANECSVVSGMPTERGNLIFDFEQG-MLPPEPQLGNV 115
            |..||...|.:....:::   ..:::|     ||                |.| .|..||:| ::
Human    19 FAPEPSSPGAARAAAAAARLHGGFDSD-----CS----------------EDGEALNGEPEL-DL 61

  Fly   116 EYKLKLVNPSKQRFEHLVTQMKWRLREGNGEAIYEIGVSDAGYLQGLSDKDMNASLTTLKQMAHS 180
            ..||.||:|:.::::.|:.||..|:.||.||.||.||....|...|||:.||.||..|:|.||..
Human    62 TSKLVLVSPTSEQYDSLLRQMWERMDEGCGETIYVIGQGSDGTEYGLSEADMEASYATVKSMAEQ 126

  Fly   181 LGASTSVLRRKTIAARRAVAEVLVRKIPDDQHNIEV--------RVAVLGGADAGKSTLLGVLTQ 237
            :.|...:||.:..|..| |.:.||||...|...:||        ||||:|..||||||||||||.
Human   127 IEADVILLRERQEAGGR-VRDYLVRKRVGDNDFLEVRCMGSSTRRVAVVGNVDAGKSTLLGVLTH 190

  Fly   238 DELDNGHGRARLNMFRHMHEIQSGRTSCISHETLGFDALGNVVNY--KYNEMMTAEEISDRSSKL 300
            .|||||.|.||..:|||.|||:|||||.:.::.||||:.|||||.  .:...:...:|.::|:|:
Human   191 GELDNGRGFARQKLFRHKHEIESGRTSSVGNDILGFDSEGNVVNKPDSHGGSLEWTKICEKSTKV 255

  Fly   301 VTFMDLAGHRRYMRTTVQALSGYSPHYAMLVVSAGSGCNDTTEEHLAIVRALDMPFFVLVTKTDI 365
            :||:|||||.:|::|||..::|:.|.:.||:|.:.:|....|:|||.:..||::|.||:|||.|:
Human   256 ITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALALNVPVFVVVTKIDM 320

  Fly   366 TSPDATVQE----LCNLLTTIGCRKVPFVVTNTDEAISAGSNQISENIVPIFCVSNVTGTGLNLV 426
             .|...:||    |..||.:.||||:|.:|.:.|:.|...||..||.:.|||.:|||||..|:|:
Human   321 -CPANILQETLKLLQRLLKSPGCRKIPVLVQSKDDVIVTASNFSSERMCPIFQISNVTGENLDLL 384

  Fly   427 TKFLYVLSPGISNAEKDRLEQESCEFQVDEIFRVSDVGPVVGGLLVQGVLTENMAMKIGPLPDGS 491
            ..||.:|||..|..     |:|..|||:|:.:.|..||.||.|..::|::..|..:.:||.|.|:
Human   385 KMFLNLLSPRTSYR-----EEEPAEFQIDDTYSVPGVGTVVSGTTLRGLIKLNDTLLLGPDPLGN 444

  Fly   492 FHPVTVNTIHRNKAPCRVVRAGQSASLSFSMDQDVPTLRSGMVLLGDIGNSLDEPYGTFFFQAKV 556
            |..:.|.:|||.:.|.:.||.||:||.:....:. .::|.|||::....|    |..::.|:|::
Human   445 FLSIAVKSIHRKRMPVKEVRGGQTASFALKKIKR-SSIRKGMVMVSPRLN----PQASWEFEAEI 504

  Fly   557 SVLFHATAIYVGFQTTVHIGSIRQTAVIRGIMGGERLGTNDCASVMFEFVGHPEYVRPGMRILFR 621
            .||.|.|.|...:|..||.|||||||.|.. |..:.|.|.|.|:|.|.|:..|||:....|::||
Human   505 LVLHHPTTISPRYQAMVHCGSIRQTATILS-MDKDCLRTGDKATVHFRFIKTPEYLHIDQRLVFR 568

  Fly   622 EGTSKGIGVVTQVF------PVN 638
            ||.:|.:|.:|::.      |:|
Human   569 EGRTKAVGTITKLLQTTNNSPMN 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2017NP_649603.3 GTPBP1 100..635 CDD:227583 233/549 (42%)
GTPBP1_like 217..436 CDD:206728 110/224 (49%)
GTPBP_II 450..536 CDD:293895 32/85 (38%)
GTPBP_III 547..634 CDD:294007 37/86 (43%)
GTPBP1XP_016884588.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5258
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62195
OrthoDB 1 1.010 - - D305827at33208
OrthoFinder 1 1.000 - - FOG0002013
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100969
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.820

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