DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2017 and GTPBP2

DIOPT Version :9

Sequence 1:NP_649603.3 Gene:CG2017 / 40733 FlyBaseID:FBgn0037391 Length:643 Species:Drosophila melanogaster
Sequence 2:NP_061969.3 Gene:GTPBP2 / 54676 HGNCID:4670 Length:602 Species:Homo sapiens


Alignment Length:581 Identity:282/581 - (48%)
Similarity:385/581 - (66%) Gaps:45/581 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 NGNSSGGGSSSSDYETDANANECSVVSGMPTERGNLIFDFEQGMLPPEPQLGNVEYKLKLVNPSK 126
            ||.:.||.:::..|                              ||||.:.||:||||||||||:
Human    45 NGRNRGGKANNPPY------------------------------LPPEAEDGNIEYKLKLVNPSQ 79

  Fly   127 QRFEHLVTQMKWRLREGNGEAIYEIGVSDAGYLQGLSDKDMNASLTTLKQMAHSLGASTSVLRRK 191
            .|||||||||||||:||.|||:|:|||.|.|.|.||::::|.|||.||.:||..:||..:|||.:
Human    80 YRFEHLVTQMKWRLQEGRGEAVYQIGVEDNGLLVGLAEEEMRASLKTLHRMAEKVGADITVLRER 144

  Fly   192 TI----AARRAVAEVLVRKIPDDQHNIEVRVAVLGGADAGKSTLLGVLTQDELDNGHGRARLNMF 252
            .:    ...|.:.||||||:||:|..:::||||||..|:|||||||||||.|||||.||||||:|
Human   145 EVDYDSDMPRKITEVLVRKVPDNQQFLDLRVAVLGNVDSGKSTLLGVLTQGELDNGRGRARLNLF 209

  Fly   253 RHMHEIQSGRTSCISHETLGFDALGNVVNYKYNEMMTAEEISDRSSKLVTFMDLAGHRRYMRTTV 317
            ||:|||||||||.||.|.|||::.|.|||  |::..|||||.:.|||::||:|||||.:|:.||:
Human   210 RHLHEIQSGRTSSISFEILGFNSKGEVVN--YSDSRTAEEICESSSKMITFIDLAGHHKYLHTTI 272

  Fly   318 QALSGYSPHYAMLVVSAGSGCNDTTEEHLAIVRALDMPFFVLVTKTDI---TSPDATVQELCNLL 379
            ..|:.|.|..|:|:|||.:|...||.|||.:..||.:|||::|:|.|:   |:.:.||::|..:|
Human   273 FGLTSYCPDCALLLVSANTGIAGTTREHLGLALALKVPFFIVVSKIDLCAKTTVERTVRQLERVL 337

  Fly   380 TTIGCRKVPFVVTNTDEAISAGSN-QISENIVPIFCVSNVTGTGLNLVTKFLYVLSPGISNAEKD 443
            ...||.|||.:||:.|:|::|... ..|.|:.|||.:|:|:|..|:|:..||.:|.|..::.|::
Human   338 KQPGCHKVPMLVTSEDDAVTAAQQFAQSPNVTPIFTLSSVSGESLDLLKVFLNILPPLTNSKEQE 402

  Fly   444 RLEQESCEFQVDEIFRVSDVGPVVGGLLVQGVLTENMAMKIGPLPDGSFHPVTVNTIHRNKAPCR 508
            .|.|:..|||||||:.|.:||.||||.|..|:..|...:.:||..||.|..:.|.:|.||::.||
Human   403 ELMQQLTEFQVDEIYTVPEVGTVVGGTLSSGICREGDQLVVGPTDDGCFLELRVCSIQRNRSACR 467

  Fly   509 VVRAGQSASLSFSMDQDVPTLRSGMVLLGDIGNSLDEPYGTFFFQAKVSVLFHATAIYVGFQTTV 573
            |:||||:|:|:.. |.|...||.|||::....|    |.....|:|::.:|||||....|||.||
Human   468 VLRAGQAATLALG-DFDRALLRKGMVMVSPEMN----PTICSVFEAEIVLLFHATTFRRGFQVTV 527

  Fly   574 HIGSIRQTAVIRGIMGGERLGTNDCASVMFEFVGHPEYVRPGMRILFREGTSKGIGVVTQV 634
            |:|::|||||:..|...::|.|.:.|.|.|.|:.||||::.|.::|||||.:||||.||.|
Human   528 HVGNVRQTAVVEKIHAKDKLRTGEKAVVRFRFLKHPEYLKVGAKLLFREGVTKGIGHVTDV 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2017NP_649603.3 GTPBP1 100..635 CDD:227583 277/543 (51%)
GTPBP1_like 217..436 CDD:206728 120/222 (54%)
GTPBP_II 450..536 CDD:293895 42/85 (49%)
GTPBP_III 547..634 CDD:294007 42/86 (49%)
GTPBP2NP_061969.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 16..64 9/48 (19%)
GTPBP1 59..588 CDD:227583 276/535 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165153168
Domainoid 1 1.000 135 1.000 Domainoid score I5006
eggNOG 1 0.900 - - E1_COG5258
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10420
Inparanoid 1 1.050 521 1.000 Inparanoid score I1270
Isobase 1 0.950 - 0 Normalized mean entropy S2520
OMA 1 1.010 - - QHG62195
OrthoDB 1 1.010 - - D305827at33208
OrthoFinder 1 1.000 - - FOG0002013
OrthoInspector 1 1.000 - - oto91725
orthoMCL 1 0.900 - - OOG6_100969
Panther 1 1.100 - - LDO PTHR43721
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3896
SonicParanoid 1 1.000 - - X5002
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.840

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