DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2017 and eEF1alpha2

DIOPT Version :9

Sequence 1:NP_649603.3 Gene:CG2017 / 40733 FlyBaseID:FBgn0037391 Length:643 Species:Drosophila melanogaster
Sequence 2:NP_524611.1 Gene:eEF1alpha2 / 43736 FlyBaseID:FBgn0000557 Length:462 Species:Drosophila melanogaster


Alignment Length:412 Identity:96/412 - (23%)
Similarity:156/412 - (37%) Gaps:93/412 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 QHNIEVRVAVLGGADAGKSTLLGVLTQDELDNGHGRARLNMF-RHMHEIQSGRTSCISHETLGFD 274
            :..|.:.:.|:|..|:||||..|.|...  ..|..:..:..| :...|:..|             
  Fly     3 KEKIHINIVVIGHVDSGKSTTTGHLIYK--CGGIDKRTIEKFEKEAQEMGKG------------- 52

  Fly   275 ALGNVVNYKYN---EMMTAE-------EIS----DRSSKLVTFMDLAGHRRYMRTTVQALSGYSP 325
                  ::||.   :.:.||       :|:    :.|...||.:|..|||.:::..:...|  ..
  Fly    53 ------SFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS--QA 109

  Fly   326 HYAMLVVSAGSG-------CNDTTEEHLAIVRALDMPFFVL-VTKTDITSP-------DATVQEL 375
            ..|:|:|:||:|       .|..|.||..:...|.:...:: |.|.|.|.|       :...:|:
  Fly   110 DCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEARYEEIKKEV 174

  Fly   376 CNLLTTIGCR--KVPFVVTNTDEAISA--GSNQI--SENIVPIF---CVSNVTG--TGLNLVTKF 429
            .:.:..||..  .|.||      .||.  |.|.:  ||. :|.|   .|....|  .|..|:...
  Fly   175 SSYIKKIGYNPASVAFV------PISGWHGDNMLEPSEK-MPWFKGWSVERKEGKAEGKCLIDAL 232

  Fly   430 LYVLSPGISNAEKDRLEQESCEFQVDEIFRVSDVGPVVGGLLVQGVLTENMAMKIGPLPDGSFHP 494
            ..:|.|       .|...:.....:.:::::..:|.|..|.:..|:|...|.:...|:     :.
  Fly   233 DAILPP-------QRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGLLKPGMVVNFAPV-----NL 285

  Fly   495 VT-VNTIHRNKAPCRVVRAGQSASLSFSMDQDVPTLRSGMVLLGDIGNSLDEPYGTFFFQAKVSV 558
            || |.::..:.........|.:...:.. :..|..||.|.| .||..|  :.|.|...|.|:|.|
  Fly   286 VTEVKSVEMHHEALTEAMPGDNVGFNVK-NVSVKELRRGYV-AGDSKN--NPPRGAADFTAQVIV 346

  Fly   559 LFHATAIYVGFQT-----TVHI 575
            |.|...|..|:..     |.||
  Fly   347 LNHPGQIANGYTPVLDCHTAHI 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2017NP_649603.3 GTPBP1 100..635 CDD:227583 96/412 (23%)
GTPBP1_like 217..436 CDD:206728 61/259 (24%)
GTPBP_II 450..536 CDD:293895 16/86 (19%)
GTPBP_III 547..634 CDD:294007 12/34 (35%)
eEF1alpha2NP_524611.1 PTZ00141 1..450 CDD:185474 96/412 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464616
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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