DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2017 and mIF2

DIOPT Version :10

Sequence 1:NP_649603.3 Gene:CG2017 / 40733 FlyBaseID:FBgn0037391 Length:643 Species:Drosophila melanogaster
Sequence 2:NP_651621.2 Gene:mIF2 / 43382 FlyBaseID:FBgn0039588 Length:696 Species:Drosophila melanogaster


Alignment Length:409 Identity:85/409 - (20%)
Similarity:139/409 - (33%) Gaps:155/409 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 ASLTTLKQMAHSLGASTSVL-----------RRKTIAARRAVAEVLVRKIPDDQHNIEVRVAVLG 222
            |.|..::::|..|||.|.|:           :.:.:|.|...|..|::..|.       .|.|:|
  Fly   112 ADLKIIQEIAKKLGAKTRVVATPEETNADEQKERDVAPRPPAAPELLQPRPP-------VVTVMG 169

  Fly   223 GADAGKSTLLGVLTQDELDNGHGRARLNMFRHMHEIQSGRTSCISHETLGFDALGNVVNYKYNEM 287
            ..|.||:||        ||:..|.          ::.:|....|:.....|             .
  Fly   170 HVDHGKTTL--------LDSLRGA----------DVAAGEAGGITQHIGAF-------------T 203

  Fly   288 MTAEEISDRSSKLVTFMDLAGHRRYMRTTVQALSGYSPHYAMLVVSAGSGCNDTTEEHLAIVRAL 352
            :|.|     :.:.|||:|..||..:  :.::|....:....:|||:|..|....|.|.:.:.:..
  Fly   204 VTLE-----NGERVTFLDTPGHAAF--SAMRARGAVATDIIVLVVAAEDGVMAQTREVIQLAKEA 261

  Fly   353 DMPFFVLVTKTDITSPDATVQELCNLLTTIGCRKVPFVVTNTDEAISAGSNQISENIVPIFCVSN 417
            .:|..|.:.|.|  .|:|.:::....|..:|.            |:......:  .::||   |.
  Fly   262 QVPIIVALNKID--KPEANIEKSKRELAQMGL------------ALEEHGGDV--QVIPI---SA 307

  Fly   418 VTGTGLNLVTKFLYVLSPGISNAEKDRLEQESCEFQVDEIFRVSDVGPVVG------GLLVQGVL 476
            :.||.|.|:.:                              .||....::|      | ||:|::
  Fly   308 LKGTNLELLAE------------------------------AVSTQATLMGLKADPTG-LVEGIV 341

  Fly   477 TENMAMKIGPLPDGSFHPVTVNTIHRNKAPCRVVRAGQSASLSFSMDQDVPTLRSGMVLLGDIGN 541
            .|:   |..|              .|.|....:|..|              |||.|.|||..:.:
  Fly   342 VES---KTDP--------------RRGKLSTAIVSRG--------------TLRKGSVLLSGLAH 375

  Fly   542 SLDEPYGTFFFQAKVSVLF 560
                        |||..||
  Fly   376 ------------AKVRGLF 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2017NP_649603.3 GTPBP1_like 217..436 CDD:206728 46/218 (21%)
GTPBP_II 450..536 CDD:293895 19/91 (21%)
GTPBP_III 547..634 CDD:294007 5/14 (36%)
mIF2NP_651621.2 InfB 159..688 CDD:440298 73/362 (20%)

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