DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2017 and gtpbp1

DIOPT Version :9

Sequence 1:NP_649603.3 Gene:CG2017 / 40733 FlyBaseID:FBgn0037391 Length:643 Species:Drosophila melanogaster
Sequence 2:XP_005164056.1 Gene:gtpbp1 / 378721 ZFINID:ZDB-GENE-030909-12 Length:670 Species:Danio rerio


Alignment Length:628 Identity:237/628 - (37%)
Similarity:355/628 - (56%) Gaps:66/628 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SNTHTETIEDPRIVAQYCISNCQHIMESFL--SLFDPNQDDGFEEEPELNGNSSGGGSSSSDYET 77
            |.|.|:.:.:|         ....:.||.:  |:|.|.:..|.::|              ||...
Zfish     3 SLTTTDPVFNP---------GAMGLPESVVPASMFAPGRGCGDDDE--------------SDCFD 44

  Fly    78 DANANECSVVSGMPTERGNLIFDFEQGMLPPEPQLGNVEYKLKLVNPSKQRFEHLVTQMKWRLRE 142
            |.:     :.:|...:.|   .||..              ||.||:|:.::::.|:.|::.|:.|
Zfish    45 DGD-----MFNGETVDLG---IDFSS--------------KLALVSPNGEQYDLLLRQLRERMDE 87

  Fly   143 GNGEAIYEIGVSDAGYLQGLSDKDMNASLTTLKQMAHSLGASTSVLRRKTIAARRAVAEVLVRKI 207
            |.||.||.:||...|...||::.||.||:.|::.|...:.|...:||.:|.|..: |.:.|:|:.
Zfish    88 GCGETIYVLGVGSDGGDYGLNESDMQASVATVRSMCEQIEADLILLRERTEAGGQ-VRDYLIRRR 151

  Fly   208 PDDQHNIEVRVAVLGGADAGKSTLLGVLTQDELDNGHGRARLNMFRHMHEIQSGRTSCISHETLG 272
            ..:...:||||||:|..||||||||||||..|||||.|.||..:|||.||::|||||.:.::.||
Zfish   152 VGEADFLEVRVAVVGNVDAGKSTLLGVLTHGELDNGRGFARQKLFRHKHEMESGRTSSVGNDILG 216

  Fly   273 FDALGNVVNY--KYNEMMTAEEISDRSSKLVTFMDLAGHRRYMRTTVQALSGYSPHYAMLVVSAG 335
            ||..|.|||.  .:...:...:|.::|||::||:|||||.:|::|||..::|:.|.:.||::.:.
Zfish   217 FDQEGQVVNKPDSHGGSLDWTKICEKSSKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMIGSN 281

  Fly   336 SGCNDTTEEHLAIVRALDMPFFVLVTKTDITSPDATVQELCNLLTTI----GCRKVPFVVTNTDE 396
            :|....|:|||.:..||::|.||:|||.|: .|...:||...||..|    ||||:|.:|.|.|:
Zfish   282 AGIVGMTKEHLGLALALNVPVFVVVTKIDM-CPANILQETLKLLQKILKSPGCRKIPVLVQNKDD 345

  Fly   397 AISAGSNQISENIVPIFCVSNVTGTGLNLVTKFLYVLSPGISNAEKDRLEQESCEFQVDEIFRVS 461
            .|...||..||.|.|||.:|||||..::|:..||.:||.  .::.||   .|..|||:|:.:.|.
Zfish   346 VIVTASNFSSERICPIFQISNVTGENMDLLKMFLNLLSS--RSSFKD---HEPAEFQIDDTYSVP 405

  Fly   462 DVGPVVGGLLVQGVLTENMAMKIGPLPDGSFHPVTVNTIHRNKAPCRVVRAGQSASLSFSMDQDV 526
            .||.||.|..::|::..|..:.:||.|.|:|..:||.:|||.:.|.:.||.||:||.:....:. 
Zfish   406 GVGTVVSGTTLRGLIRLNDTLLLGPDPLGAFLSITVKSIHRKRMPVKEVRGGQTASFALKKIKR- 469

  Fly   527 PTLRSGMVLLGDIGNSLDEPYGTFFFQAKVSVLFHATAIYVGFQTTVHIGSIRQTAVIRGIMGGE 591
            .::|.|||::....|    |...:.|:|::.||.|.|.|...:|..||.|||||||.|.. |..:
Zfish   470 SSIRKGMVMVSPRLN----PQAYWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILS-MTRD 529

  Fly   592 RLGTNDCASVMFEFVGHPEYVRPGMRILFREGTSKGIGVVTQV 634
            .|.|.|.|:|.|.|:..|||:....|::||||.:|.:|.:|::
Zfish   530 CLRTGDKATVHFRFIKTPEYLHTDQRLVFREGRTKAVGTITKL 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2017NP_649603.3 GTPBP1 100..635 CDD:227583 221/541 (41%)
GTPBP1_like 217..436 CDD:206728 109/224 (49%)
GTPBP_II 450..536 CDD:293895 33/85 (39%)
GTPBP_III 547..634 CDD:294007 37/86 (43%)
gtpbp1XP_005164056.1 GTPBP1 77..573 CDD:227583 214/509 (42%)
GTPBP1_like 161..385 CDD:206728 109/226 (48%)
GTPBP_II 394..480 CDD:293895 33/86 (38%)
GTPBP_III 486..572 CDD:294007 37/86 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5258
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62195
OrthoDB 1 1.010 - - D305827at33208
OrthoFinder 1 1.000 - - FOG0002013
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100969
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.820

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