DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2017 and mEFG1

DIOPT Version :9

Sequence 1:NP_649603.3 Gene:CG2017 / 40733 FlyBaseID:FBgn0037391 Length:643 Species:Drosophila melanogaster
Sequence 2:NP_609105.1 Gene:mEFG1 / 34004 FlyBaseID:FBgn0263133 Length:745 Species:Drosophila melanogaster


Alignment Length:667 Identity:136/667 - (20%)
Similarity:213/667 - (31%) Gaps:247/667 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 LVTQMKWRLREGNG----EAIYEIGVSDAGYLQGLSDKDMNASLTTLK--QMAHSLGASTSVLRR 190
            |:|    ||..||.    .|:..:|  .|||       ..:|..:..|  :...::|.|..:...
  Fly     3 LIT----RLLTGNNTLRLRALKSLG--KAGY-------SSHAKFSEHKPIERIRNIGISAHIDSG 54

  Fly   191 KTIAARR------AVAEVLVRKIPDDQHNIEVRVAVLGGADAGKSTLLGVLTQDELDNGHGRARL 249
            ||....|      .:||:         |  |||         ||..:...:...||:...|..  
  Fly    55 KTTLTERILFYTGRIAEM---------H--EVR---------GKDNVGATMDSMELERQRGIT-- 97

  Fly   250 NMFRHMHEIQSGRTSCISHETLGFDALGNVVNYKYNEMMTAEEISDRSSKL-------------V 301
                    |||..|     .||..|...|:::...:...|.|  .:|:.::             |
  Fly    98 --------IQSAAT-----YTLWKDTNINIIDTPGHVDFTVE--VERALRVLDGAVLVLCAVGGV 147

  Fly   302 TFMDLAGHRRYMRTTVQALS--------GYSPH---------------YAMLVVSAGSGCNDTTE 343
            ....|..:|:..|..|..|:        |.:|:               :..|.:...|.|....:
  Fly   148 QSQTLTVNRQMKRYNVPCLAFINKLDRLGSNPYRVLSQMRSKMNHNAAFIQLPIGVESNCKGIVD 212

  Fly   344 -----------EHLAIVRALDMPFFVLVTKTDITSPDATVQELCNLLTTIG---CRKVPFVVTNT 394
                       ||...:|..::|..:.|  ..:......::.|.|...|:|   ..:.||    |
  Fly   213 LVREKAIYFEGEHGMDIRLDEIPQDMRV--ESLERRQELIEHLSNADETLGELFLEEKPF----T 271

  Fly   395 DEAISAGSNQ--ISENIVPIFCVSNVTGTGLN------LVTKFL-YVLSPG-ISN---AEKDRLE 446
            ::.|.|...:  |:....|:     :.||.|.      |:...| |:.:|| :.|   .||:..:
  Fly   272 EDDIKAALRRTCINRTFTPV-----LVGTALKNKGVQPLLDAVLDYLPNPGEVENLGFIEKEGQD 331

  Fly   447 QES--------------------------------CEFQV----DEIF----------------- 458
            .|.                                |...|    |.||                 
  Fly   332 PEKVVLNPARDGKDPFVGLAFKLEAGRFGQLTYLRCYQGVLRKGDNIFNARTNKKVRIARLVRLH 396

  Fly   459 --RVSDVGPVVGG--LLVQGV-----------LTENMAMKIGPLPDGSFHPVTVNTIHRN----- 503
              ::.||..|..|  ..:.||           ...|::|:...:|:    ||....|..|     
  Fly   397 SNQMEDVNEVYAGDIFALFGVDCASGDTFTTNPKNNLSMESIFVPE----PVVSMAIKPNNTKDR 457

  Fly   504 ----KAPCRVVRAGQSASLSFSMDQDV-PTLRSGMVLLGDI-----GNSLDEPYGTFFFQAKVSV 558
                ||..|..:  :..:..|..|.|| .||.|||   |::     ...::..||......|..|
  Fly   458 DNFSKAIARFTK--EDPTFHFFFDNDVKETLVSGM---GELHLEIYAQRMEREYGCPVTLGKPKV 517

  Fly   559 LFHATAI------YVGFQTTVHIGSIRQTAVIRGIMGGERLGTNDCASVMFEFVGH------PEY 611
            .|..|.:      |:..:.:   |...|.|.|.|:|  |.|..|.  :.:.|||..      |:.
  Fly   518 AFRETLVGPCEFDYLHKKQS---GGSGQYARIIGVM--EPLPPNQ--NTLLEFVDETVGTNVPKQ 575

  Fly   612 VRPGMRILFREGTSKGI 628
            ..||:...:||...||:
  Fly   576 FVPGVEKGYREMAEKGM 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2017NP_649603.3 GTPBP1 100..635 CDD:227583 136/667 (20%)
GTPBP1_like 217..436 CDD:206728 50/277 (18%)
GTPBP_II 450..536 CDD:293895 30/131 (23%)
GTPBP_III 547..634 CDD:294007 26/94 (28%)
mEFG1NP_609105.1 EF-G 44..316 CDD:206673 60/319 (19%)
PRK12740 48..727 CDD:237186 122/609 (20%)
mtEFG1_II_like 347..427 CDD:293908 11/79 (14%)
EFG_III 441..516 CDD:293919 21/83 (25%)
EFG_mtEFG1_IV 519..636 CDD:238715 22/81 (27%)
mtEFG1_C 641..718 CDD:239764
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464641
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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