DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1213 and VBA1

DIOPT Version :9

Sequence 1:NP_001246937.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_013806.1 Gene:VBA1 / 855113 SGDID:S000004694 Length:562 Species:Saccharomyces cerevisiae


Alignment Length:421 Identity:81/421 - (19%)
Similarity:147/421 - (34%) Gaps:137/421 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 SDEDAWI-SSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLI 149
            |.:..|| :|.:.......| :.|.::|..|||..||::..||.|...|...|..|....::|.|
Yeast    70 SSKKQWIATSFLLTNTAFQP-LYGKLSDITGRKSALLTAQFFFGLGCLLTCFARNVTEFSIARAI 133

  Fly   150 QGFGVGFVMTVQPMYVGEISTDNVRGA-TGSLMQLFIVGGILYVYAIGPYVSYQALQWCC---IV 210
            .|.|.|.:..:..:.|.:|.|...||. .|....:|..|.:|.....|.::  :.:.|..   |.
Yeast   134 CGIGAGGLNAISSIAVSDICTARERGVYQGYANIVFGFGQLLGAPLGGVFI--ETIGWRALFGIQ 196

  Fly   211 VPVV----------FDLVFYMMPESPYFFAGKGRKSEALKSLQFLRGQSAEGVHDEMAEIQANVE 265
            |||:          .::..:.:|..        ::...||:|.                 :.::.
Yeast   197 VPVIMLCSVLAIKNINIKLFHVPPM--------KERYTLKNLS-----------------RIDIF 236

  Fly   266 EAMASKGTVMDLFKNAGNRRALFICAGLISFQQLSGINVVLFNSQSIFASANTGLDPAIATIIIG 330
            .:::...|:..:         ||:|:     .||:.:.:.||.                      
Yeast   237 GSLSLVATISGV---------LFLCS-----SQLNKLYLALFT---------------------- 265

  Fly   331 CVQVGSSALTPLVADRLG-RKVM---LLTSSSVMSIGLAALGAFFYMQLVKGDISSVVWMPVPAL 391
               :||..:..||..... .|::   |||.|..:|..:..:.:|                     
Yeast   266 ---IGSFIVFILVERYYATEKILPFELLTRSFCLSSAVTVISSF--------------------- 306

  Fly   392 IIYNIVYCTGFGPLPWAVLGEMF--PANIKSVASSVVASTCWTLGFLVTFFYPSLD-ALGSYYAF 453
                            .|.||:|  |..::.:.:..|..|    |..:.|  ||:. |:||....
Yeast   307 ----------------VVFGEIFRSPIYLQLLQNISVTKT----GLFLIF--PSISVAVGSLVTG 349

  Fly   454 WLF---AVCMVVAFFFVLF--VVMETKGLSL 479
            |:.   .:.:....:.::|  ::|:..||.|
Yeast   350 WVLRNTKINLAHCAYQIIFGGMIMQLLGLGL 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1213NP_001246937.1 SP 42..482 CDD:273317 81/421 (19%)
MFS 47..460 CDD:119392 76/398 (19%)
VBA1NP_013806.1 MFS_Azr1_MDR_like 42..469 CDD:341045 81/421 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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