DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1213 and AMF1

DIOPT Version :9

Sequence 1:NP_001246937.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_015023.1 Gene:AMF1 / 854560 SGDID:S000005905 Length:515 Species:Saccharomyces cerevisiae


Alignment Length:510 Identity:98/510 - (19%)
Similarity:174/510 - (34%) Gaps:181/510 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 VSTFQIREGNTRTMSPEPVKSG------RIFMAAVAANLSAF-VVGTTLGWTSPIGPKLKSEDTS 76
            :|.|.|::...:::..|....|      .:..|.:..:|:.. ::|.:.|.|:            
Yeast    26 LSEFDIQDERPKSLLWESAFVGVLCSAQLMTQAGLGQSLAPLHIIGNSFGTTN------------ 78

  Fly    77 DSPLSRPITSDEDAWISSL--IAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAF-------- 131
                     :.:.:|.:|.  :.||..:  .:||.:.|..|.|       .||||.|        
Yeast    79 ---------AGQLSWFASAYSLTVGTFI--LIAGRLGDIFGHK-------KFFVLGFFWYALWSL 125

  Fly   132 --GLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNVR----------GATGSLMQLF 184
              |.::.::::: ....|..||.|..|::......:|.......|          .|.|......
Yeast   126 LAGFSVYSNQIF-FDCCRAFQGMGPAFLLPNAIAILGRTYKPGRRKNMVFSLFGASAPGGFFLGA 189

  Fly   185 IVGGILYVYAIGPYVSYQALQWCCIVVPVVFDLVFYMMPESPYFFAGKGRKSEALKSLQFLRGQS 249
            :...:|...|..|: :|..:...|.|:.|.   .::::|.:|.    ..|.:.:.|.|:      
Yeast   190 VFSSMLGQLAWWPW-AYWIMGIACFVLAVA---GYFVIPHTPM----PSRDASSFKLLE------ 240

  Fly   250 AEGVHDEMAEIQANVEEAMASKGTVMDLFKNAGNRRALFICAGLISFQQLSGINVVLFNSQSIFA 314
                         .::.|.:..|.|                 |||           |||    ||
Yeast   241 -------------RIDFAGSVTGVV-----------------GLI-----------LFN----FA 260

  Fly   315 SANTGLDPAI--------ATIIIGC------VQVGSSALTPLVADRLGRKVMLLTSS-----SVM 360
             .|.|  |.:        |.:|:|.      ..:.|.|..||:      ....|:|.     |.:
Yeast   261 -WNQG--PVVGWQTPYTYALLIVGTFFLVIFAYIESRAAFPLL------PFAALSSDTAFVLSCI 316

  Fly   361 SIGLAALGAF-FY----MQLVKGD---ISSVVWMPVPALIIYNIVYCTGFGPLPWAVLGEMFPAN 417
            :.|.|:.|.: ||    |:..:|.   :||..:.|| |:..:.....|||      :|....|:.
Yeast   317 AAGWASFGIWIFYTWQFMEDSRGQTPLLSSAQFSPV-AISGFCAAVTTGF------LLSHTPPST 374

  Fly   418 IKSVASSVVASTCWTLGFLVTFFYPSLDALGSYYAFWLFAVCMVVAFFFVLFVVM 472
            :     .:.|.|.:|:|.::....|      .:..:|        |..||..:||
Yeast   375 V-----MLFAMTAFTVGTILIATAP------VHQTYW--------AQTFVSIIVM 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1213NP_001246937.1 SP 42..482 CDD:273317 93/481 (19%)
MFS 47..460 CDD:119392 87/462 (19%)
AMF1NP_015023.1 MFS_Amf1_MDR_like 48..493 CDD:341029 93/488 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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