DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1213 and GEX2

DIOPT Version :9

Sequence 1:NP_001246937.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_013032.1 Gene:GEX2 / 853981 SGDID:S000001814 Length:615 Species:Saccharomyces cerevisiae


Alignment Length:598 Identity:112/598 - (18%)
Similarity:209/598 - (34%) Gaps:183/598 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ISREEETGVQYSYTEVST-FQIREGNTRTMSPEPVKSGRIFMAAVAANLSAFV--VGTTLGWTSP 65
            |.||..:. ..:|:..|| |:::|....:...:.:|...:.::      :|||  .|.:|.:|  
Yeast    23 IERERHSN-DDTYSMTSTFFKLKENEIMSAQFDSLKYKILLIS------TAFVCGFGISLDYT-- 78

  Fly    66 IGPKLKSEDT---SDSPLSRPITSDEDAWISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFF 127
                |:|..|   ::|.....:.|.... |:::::||:.|   |...::|..||..:.|.:::|:
Yeast    79 ----LRSTYTGYATNSYSEHSLLSTVQV-INAVVSVGSQV---VYSRLSDHFGRLRLFLVATIFY 135

  Fly   128 VLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQLFIVG----- 187
            ::...:...|:.:.:.....:....|          |||          |..|:.|.:..     
Yeast   136 IMGTIIQSQATRLTMYAAGSVFYNCG----------YVG----------TNLLLTLILSDFSSLK 180

  Fly   188 -GILYVYA-IGPYV-------------------SYQALQWCCI----VVPVVFDLVFYMMPESPY 227
             .:.|.|| ..||:                   |:....|..|    .:|::| |:.||..:|..
Yeast   181 WRMFYQYASYWPYIIIPWISGNIITAANPQKNWSWNIAMWAFIYPLSTLPIIF-LILYMKYKSSK 244

  Fly   228 FFAGKGRKSEALK--------SLQF-------------------------LRGQSAEGVHDEMAE 259
            ....:..|.:|.|        :|.|                         |..::::..|:    
Yeast   245 TAEWRSLKEQARKERTGGLFENLVFLFWKLDIVGILLITVSLGCILVPLTLANETSQKWHN---- 305

  Fly   260 IQANVEEAMASKGTVMDLFKNAGNRRALFICAGLISFQQLSG------INVVLFNSQSIFASANT 318
              :.:...:.|.|.:..:|.   ...|.|..:.|:.|:.||.      :.|..||..:.|.|.  
Yeast   306 --SKIIATLVSGGCLFFIFL---YWEAKFAKSPLLPFKLLSDRGIWAPLGVTFFNFFTFFISC-- 363

  Fly   319 GLDPAIATIIIGCVQVGSSA-----LTPLVADRLGRKVMLL---TSSSVMSI--GLAA----LGA 369
              |.....:::...:..:||     |...||........||   |....:|:  |.||    :|.
Yeast   364 --DYLYPVLLVSMKESSTSAARIVNLPDFVAATASPFYSLLVAKTRKLKLSVIGGCAAWMVCMGL 426

  Fly   370 FFYMQ----LVKGDISSVVWMPVPALIIYNIV--------------YCTGFGPLPWAVLGEMFPA 416
            |:..:    ..:|.|::.|.|.:..|:..|.|              ..||. ...::.||....|
Yeast   427 FYKYRGGSGSHEGVIAASVIMGLSGLLCSNSVIVILQAMTTHSRMAVITGI-QYTFSKLGAAIGA 490

  Fly   417 NI--------------KSVASSVVASTCWTLGFLVTFFY----PSLDALGSYYAF------WLFA 457
            ::              |::.:..:|...:...:.....|    |..||:...|.:      .:..
Yeast   491 SVSGAIWTQTMPNQLYKNLGNDTLAEIAYASPYTFISDYPWGSPERDAVVESYRYVQRIIMTVGL 555

  Fly   458 VCMVVAFFFVLFV 470
            .|.|..|.|.:|:
Yeast   556 ACTVPFFTFTMFM 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1213NP_001246937.1 SP 42..482 CDD:273317 103/559 (18%)
MFS 47..460 CDD:119392 98/542 (18%)
GEX2NP_013032.1 MFS_ARN_like 59..571 CDD:340880 103/561 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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