DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1213 and VPS73

DIOPT Version :9

Sequence 1:NP_001246937.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_011411.3 Gene:VPS73 / 852774 SGDID:S000003072 Length:486 Species:Saccharomyces cerevisiae


Alignment Length:427 Identity:100/427 - (23%)
Similarity:196/427 - (45%) Gaps:62/427 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 PITSDEDAWISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWI----- 142
            |:..::...::|:..:|.::..:.|..:|:..|||:    |||   :...||:|.|.:..     
Yeast    85 PLNDEQIGIVTSVFCIGGILGSYFATSLANIYGRKF----SSL---INCTLNIVGSLIIFNSNSY 142

  Fly   143 --LYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQLFIVGGILYVYAIG-PYVSYQAL 204
              |.:.|::.|...|.::.:.|:::.|::.....|..||:.|:.|..|:|....|. |.......
Yeast   143 RGLIIGRILVGISCGSLIVIIPLFIKEVAPSGWEGLLGSMTQICIRLGVLLTQGIALPLTDSYRW 207

  Fly   205 QWC---CIVVPVVFDLVFYMMPESPYFFAGKGRKSEALKSLQFLRGQSAEGVHDEMAEIQANVE- 265
            :|.   ..::.|:...:::::.|||.:....||.::|..||..|||.:.:....|:.:.|..:| 
Yeast   208 RWILFGSFLIAVLNFFMWFIVDESPKWLLAHGRVTDAKLSLCKLRGVTFDEAAQEIQDWQLQIES 272

  Fly   266 ----------EAMASKGTVMDLFKNAGNRRALFICAGLISFQQLSGIN-VVLFNSQSIFASANTG 319
                      .:::...::....::..|.::..:...|:..||..||| :||:.::.|     :.
Yeast   273 GDPLIEPTTTNSISGSNSLWKYLRDRTNVKSRHVITVLLFGQQFCGINSIVLYGTKII-----SQ 332

  Fly   320 LDPAIA---TIIIGCVQVGSSALTPLVADRLGRKVMLLTSSSVMSIGLAALGAFFYMQLVKGDIS 381
            |.|..|   ...|..|.|..:.|..|:...|.||.:|:||:.::|:....:|  ..|...|.:: 
Yeast   333 LYPQHAIRINFFISMVNVLVTILVSLLIHSLPRKPLLMTSTVLVSVTAFIMG--IAMNHNKMNL- 394

  Fly   382 SVVWMPVPALIIYNIVY----CTGFGPLPWAVLGEMF-PANIKSVASSVVASTC-WTLGFLVTFF 440
                     ||:::.:|    ..|..|||:.::.|:. |.::  |.:....:.| |...|::.:.
Yeast   395 ---------LIVFSFIYMGVFTMGLNPLPFIIMREVSKPQDM--VLAQRYGTICNWVGTFIIAYT 448

  Fly   441 YPSLDALGSYYAFWLFAV--CMVVAFFFVLFVVMETK 475
            :|.:..:.|.|.|.:||:  |.:.||.:.  .|.|||
Yeast   449 FPIIHDVLSGYVFIIFAIIACSISAFIWK--KVPETK 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1213NP_001246937.1 SP 42..482 CDD:273317 100/427 (23%)
MFS 47..460 CDD:119392 93/410 (23%)
VPS73NP_011411.3 MFS_GLUT_Class1_2_like 31..484 CDD:340915 100/427 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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