DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1213 and VBA4

DIOPT Version :9

Sequence 1:NP_001246937.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_010404.1 Gene:VBA4 / 851697 SGDID:S000002526 Length:768 Species:Saccharomyces cerevisiae


Alignment Length:492 Identity:95/492 - (19%)
Similarity:164/492 - (33%) Gaps:140/492 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPSISREEETGVQYSYTEVSTFQIREGNTRTMSPEPVKS---GRIFMAAVAANLSAFVVGTTLGW 62
            :|....:.|.|:...|.|           .|.|.|.|..   .|||.:.:...|  |.:......
Yeast   217 IPQSIGDVENGLNPPYVE-----------NTSSDELVHDLTRRRIFSSCMCTYL--FFIAMDSSI 268

  Fly    63 TSPIGPKLKSEDTSDSPLSRPITSDEDAWISSLI--------AVGALVAPFVAGPMADRIGRKWV 119
            ...|..|:.||             ..:.|..||:        |:|.||  |:...:...:  |.:
Yeast   269 ILVIASKIASE-------------FHELWRLSLVISAYLLSNAIGQLV--FLKLSLISSV--KLL 316

  Fly   120 LLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDN-VRGATGSLMQL 183
            |..:...|:|...|:..::..|....:|.:.|||.|.::.::...:...|..| .|.:..:.|..
Yeast   317 LCIAQFSFILGGYLSWSSAHFWTFIFARCVTGFGGGSLIALKSTIMNRFSQKNDSRYSLSASMIT 381

  Fly   184 FIVGGILYVYAIGPYVSYQALQW-CCIVVPVVFDLV--------FYMMPESPYFFAGKGRKSEAL 239
            |.:|.::..:.:..:.|.....| ...::||.|.||        .|.:..:.|     ||.:..|
Yeast   382 FAMGVVIGPFMMNLFDSSHGSGWRNAFLIPVPFCLVNASIMLADMYSVKSTLY-----GRPTPTL 441

  Fly   240 KS---------------------LQFLRGQSAE--GVHDEMAEIQANVEEAMASKGTVM------ 275
            ..                     |.|::..|.:  |:.:. ..|||.:...:...|.:.      
Yeast   442 WKRFKNTLLSPDLYEILTLTLFLLCFVQVTSLDLTGLKNN-TMIQALLFSVIIVCGILFFLIETS 505

  Fly   276 DLFKNA-------GNRRALFICAGLISFQQLSGINVVLFNSQSIFASANTG-------LDPAIAT 326
            |.:.|:       |::|.::...| |||...:.:.::.|.:.......|..       |.|...:
Yeast   506 DTYMNSVISMSLQGDKRLIWTMIG-ISFCFAALMCIIPFGTTYFIIVLNLSTLQLAERLSPFFFS 569

  Fly   327 IIIGCVQVG----------------SSALTPLVADRLGRKVMLLTSSSVMSIGLAALGAFFYMQL 375
            |::|...|.                |.|...|....:|..:.|......:.:.|..||:...:.|
Yeast   570 IVLGYFSVSYFWKSKGQNFLLKFVLSGATLLLYVALMGVSLNLPVWKQYICLSLPFLGSSMILTL 634

  Fly   376 V-----------KGDISSVVWMPVPALIIYNIVYCTG 401
            :           |..||.            :||||.|
Yeast   635 LSNLYHEYHEQRKSPISG------------SIVYCFG 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1213NP_001246937.1 SP 42..482 CDD:273317 85/448 (19%)
MFS 47..460 CDD:119392 83/443 (19%)
VBA4NP_010404.1 MFS 259..>414 CDD:421695 35/173 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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