DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1213 and RGT2

DIOPT Version :9

Sequence 1:NP_001246937.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_010143.1 Gene:RGT2 / 851417 SGDID:S000002297 Length:763 Species:Saccharomyces cerevisiae


Alignment Length:527 Identity:148/527 - (28%)
Similarity:253/527 - (48%) Gaps:78/527 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EEETGVQYSYTEVSTFQIREGNTRTMS-----PEPVKSG------RIFMAAVAANLSAFVVGTTL 60
            ::....|.|||  :.....:|...|.|     |.|::|.      .||:|     :..|:.|...
Yeast    60 DDPNAYQISYT--NNEPAGDGAIETTSILLSQPLPLRSNVMSVLVGIFVA-----VGGFLFGYDT 117

  Fly    61 GWTSPIG--PKLKSEDTSDSPLSRPITSDEDAWISSLIAV----GALVAPFVAGPMADRIGRK-W 118
            |..:.|.  |.:|   |..:|.....|:.:.|.:.|.:::    |||:||::    :|..||| .
Yeast   118 GLINSITDMPYVK---TYIAPNHSYFTTSQIAILVSFLSLGTFFGALIAPYI----SDSYGRKPT 175

  Fly   119 VLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQL 183
            ::.|:::.|.:...|.:.:..:.:|.:.|:|.|.|:|.:..|.|:|..|.:..|:|||..|..|.
Yeast   176 IMFSTAVIFSIGNSLQVASGGLVLLIVGRVISGIGIGIISAVVPLYQAEAAQKNLRGAIISSYQW 240

  Fly   184 FIVGGILYVYAI--------GPYVSYQ---ALQ--WCCIV-VPVVFDLVFYMMPESPYFFAGKGR 234
            .|..|:|...|:        || .||:   .||  |..|: |.::|      :||||.::..|..
Yeast   241 AITIGLLVSSAVSQGTHSKNGP-SSYRIPIGLQYVWSSILAVGMIF------LPESPRYYVLKDE 298

  Fly   235 KSEALKSLQFLRGQSAEG--VHDEMAEIQANVE-EAMASKGTVMDLFKNAGNR--RALFICAGLI 294
            .::|.|||.||||...|.  :.:|:.||:|..: ||.....|::|.||.:.||  :.|.|..|:.
Yeast   299 LNKAAKSLSFLRGLPIEDPRLLEELVEIKATYDYEASFGPSTLLDCFKTSENRPKQILRIFTGIA 363

  Fly   295 --SFQQLSGINVVLFNSQSIFASANTGLDPA-IATIIIGCVQVGSSALTPLVADRLGRKVMLLTS 356
              :|||.||||.:.:...:.|  .|||:|.: :.:.|...|.|..|.....:.||:||:.:||..
Yeast   364 IQAFQQASGINFIFYYGVNFF--NNTGVDNSYLVSFISYAVNVAFSIPGMYLVDRIGRRPVLLAG 426

  Fly   357 SSVMSIG---LAALGAFFYMQLVKGDISSVVWMPVPALIIYNIVYCTGFGPLPWAVLGEMFPANI 418
            ..:|:|.   :|.:|......:|...|.      :..:.::...:...:|.:.|.|..|::|..:
Yeast   427 GVIMAIANLVIAIVGVSEGKTVVASKIM------IAFICLFIAAFSATWGGVVWVVSAELYPLGV 485

  Fly   419 KSVASSVVASTCWTLGFLVTFFYPSLDALGSYYA------FWLFAVCMVVAFFFVLFVVMETKGL 477
            :|..:::.|:..|.:.|......|.:..:||:.:      |:::....|||...|.|.|.||:||
Yeast   486 RSKCTAICAAANWLVNFTCALITPYIVDVGSHTSSMGPKIFFIWGGLNVVAVIVVYFAVYETRGL 550

  Fly   478 SLQQIQD 484
            :|::|.:
Yeast   551 TLEEIDE 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1213NP_001246937.1 SP 42..482 CDD:273317 137/477 (29%)
MFS 47..460 CDD:119392 123/450 (27%)
RGT2NP_010143.1 SP 76..555 CDD:273317 143/505 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 165 1.000 Domainoid score I819
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 166 1.000 Inparanoid score I1031
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9181
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
TreeFam 00.000 Not matched by this tool.
76.760

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