DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1213 and AT1G19450

DIOPT Version :9

Sequence 1:NP_001246937.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_173377.1 Gene:AT1G19450 / 838529 AraportID:AT1G19450 Length:488 Species:Arabidopsis thaliana


Alignment Length:472 Identity:156/472 - (33%)
Similarity:247/472 - (52%) Gaps:46/472 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 SPEPVKSGRIFMAA--VAANLSAFVVGTTLGWTSPIGPKLKSEDTSDSPLSRPITSDEDAWISSL 95
            |.:.::...|.:.|  :...|.....|.|.|::||    .::..|.|..|    |..|.:...||
plant    38 SSQVIRDSSISVLACVLIVALGPIQFGFTCGYSSP----TQAAITKDLGL----TVSEYSVFGSL 94

  Fly    96 IAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTV 160
            ..|||:|....:|.:|:.:|||..|:.:::..::.:.....|.:...|||.||::|||||.:...
plant    95 SNVGAMVGAIASGQIAEYVGRKGSLMIAAIPNIIGWLSISFAKDTSFLYMGRLLEGFGVGIISYT 159

  Fly   161 QPMYVGEISTDNVRGATGSLMQLFIVGGILYVYAIGPYVSYQALQW-----CCIVVPVVFDLVFY 220
            .|:|:.||:...:|||.||:.||.:..||:..|.:|.:|.::.|..     |.:::|.:|     
plant   160 VPVYIAEIAPQTMRGALGSVNQLSVTIGIMLAYLLGLFVPWRILAVLGVLPCTLLIPGLF----- 219

  Fly   221 MMPESPYFFAGKGRKSEALKSLQFLRGQSAEGVHDEMAEIQANVEEAMASKGTVMDLFKNAGNRR 285
            .:||||.:.|..|...:...|||.|||...: :..|:.||:.:|  |.:||.:.: .|.:...||
plant   220 FIPESPRWLAKMGLTDDFETSLQVLRGFETD-ITVEVNEIKRSV--ASSSKRSAV-RFVDLKRRR 280

  Fly   286 ---ALFICAGLISFQQLSGINVVLFNSQSIFASANTGLDPAIATIIIGCVQVGSSALTPLVADRL 347
               .|.:..||::.|||.|||.|||.|.:||.||.. ....:||..:|.|||.::.:...:.|:.
plant   281 YYFPLMVGIGLLALQQLGGINGVLFYSSTIFESAGV-TSSNVATFGVGVVQVVATGIATWLVDKA 344

  Fly   348 GRKVMLLTSSSVMSIGLAALGAFFYM-QLVKGD------ISSVVWMPVPALIIYNIVYCT-GFGP 404
            ||:::|:.||..|:|.|..:...||: :.|..|      :|.|..:.|.|::|    .|: |.||
plant   345 GRRLLLMISSIGMTISLVIVAVAFYLKEFVSPDSNMYNILSMVSVVGVVAMVI----SCSLGMGP 405

  Fly   405 LPWAVLGEMFPANIKSVASSVVASTCWTLGFLVTFFYPSLDALGSYYAFWLFAVCMVVAFFFVLF 469
            :||.::.|:.|.|||.:|.|:.....|.:.:|||.....|.|..|...|.|:|   :|..|.|:|
plant   406 IPWLIMSEILPVNIKGLAGSIATLLNWFVSWLVTMTANMLLAWSSGGTFTLYA---LVCGFTVVF 467

  Fly   470 V---VMETKGLSLQQIQ 483
            |   |.||||.:|::||
plant   468 VSLWVPETKGKTLEEIQ 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1213NP_001246937.1 SP 42..482 CDD:273317 153/460 (33%)
MFS 47..460 CDD:119392 140/428 (33%)
AT1G19450NP_173377.1 MFS_GLUT6_8_Class3_like 50..482 CDD:340916 152/456 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 1 1.000 - - FOG0000275
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100060
Panther 1 1.100 - - O PTHR48021
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.820

Return to query results.
Submit another query.