DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1213 and MSS1

DIOPT Version :9

Sequence 1:NP_001246937.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_198006.1 Gene:MSS1 / 832703 AraportID:AT5G26340 Length:526 Species:Arabidopsis thaliana


Alignment Length:475 Identity:123/475 - (25%)
Similarity:213/475 - (44%) Gaps:47/475 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 MAAVAANLSAFVVGTTLGWTS----------PIGPKLKSEDTSDSPLSRPITSDEDAWISSLIAV 98
            |||....:..:.||.:.|.||          .:..|:.:....||...:........:.|||...
plant    29 MAATGGLMFGYDVGVSGGVTSMPDFLEKFFPVVYRKVVAGADKDSNYCKYDNQGLQLFTSSLYLA 93

  Fly    99 GALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPM 163
            | |.|.|.|......:||:..:|.:.:||::...||..|.::.:|...|::.|.||||.....|:
plant    94 G-LTATFFASYTTRTLGRRLTMLIAGVFFIIGVALNAGAQDLAMLIAGRILLGCGVGFANQAVPL 157

  Fly   164 YVGEISTDNVRGATGSLMQLFIVGGILYVYAIGPYVSYQALQ------WCCIV----VPVVFDLV 218
            ::.||:...:||....|.||.:..|||:    ...|:|...:      |...:    :|.:...|
plant   158 FLSEIAPTRIRGGLNILFQLNVTIGILF----ANLVNYGTAKIKGGWGWRLSLGLAGIPALLLTV 218

  Fly   219 -FYMMPESPYFFAGKGRKSEALKSLQFLRGQSAEGVHDEMAEIQANVEEAMASKGTVMDLFKN-- 280
             ..::.|:|.....:||..|....|:.:||  .:.|..|.|::   :|.:..:| .|...|:|  
plant   219 GALLVTETPNSLVERGRLDEGKAVLRRIRG--TDNVEPEFADL---LEASRLAK-EVKHPFRNLL 277

  Fly   281 -AGNRRALFICAGLISFQQLSGINVVLFNSQSIFASANTGLDPAI-ATIIIGCVQVGSSALTPLV 343
             ..||..|.|...|..|||.:|||.::|.:..:|::...|.|.:: :.::.|.|.|.|:.::...
plant   278 QRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFSTLGFGSDASLYSAVVTGAVNVLSTLVSIYS 342

  Fly   344 ADRLGRKVMLLT-------SSSVMSIGLAALGAFFYMQLVKGDISSVVWMPVPALIIYNIVYCTG 401
            .|::||:|:||.       |..|::|.|..........|.||....||.|    :..|...:...
plant   343 VDKVGRRVLLLEAGVQMFFSQVVIAIILGVKVTDTSTNLSKGFAILVVVM----ICTYVAAFAWS 403

  Fly   402 FGPLPWAVLGEMFPANIKSVASSVVASTCWTLGFLVTFFYPSLDALGSYYAFWLFAVCMVVAFFF 466
            :|||.|.:..|.||...:|...||.........|::...:.|:.....:..|..|:..:::...|
plant   404 WGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFIIAQAFLSMLCHFKFGIFIFFSAWVLIMSVF 468

  Fly   467 VLFVVMETKGLSLQQIQDRL 486
            |:|::.|||.:.::::.:|:
plant   469 VMFLLPETKNIPIEEMTERV 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1213NP_001246937.1 SP 42..482 CDD:273317 122/469 (26%)
MFS 47..460 CDD:119392 113/444 (25%)
MSS1NP_198006.1 MFS_STP 29..475 CDD:340919 119/460 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.720

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