DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1213 and AT5G18840

DIOPT Version :9

Sequence 1:NP_001246937.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_568367.1 Gene:AT5G18840 / 832002 AraportID:AT5G18840 Length:482 Species:Arabidopsis thaliana


Alignment Length:456 Identity:135/456 - (29%)
Similarity:236/456 - (51%) Gaps:38/456 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 IFMAAVAANLSAFVVGTTLGWTSPIGPKLKSEDTSDSPLSRPITSDEDAWISSLIAVGALVAPFV 106
            :..:...|...:|..|:.:|:::|....:: :|.:       ::..|.:...|::.:||::...:
plant    44 VLFSTFVAVCGSFEFGSCVGYSAPTQSSIR-QDLN-------LSLAEFSMFGSILTIGAMLGAVM 100

  Fly   107 AGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTD 171
            :|.::|..|||..:.:|:.|.:..:..........:|.:.|...|:|:|....|.|:|:.|||..
plant   101 SGKISDFSGRKGAMRTSACFCITGWLAVFFTKGALLLDVGRFFTGYGIGVFSYVVPVYIAEISPK 165

  Fly   172 NVRGATGSLMQLFIVGGILYVYAIGPYVSYQALQWC----CIVVPVVFDLVFYMMPESPYFFAGK 232
            |:||...:|.||.||.|....:.||..:|::.|...    |||  ::|.|.|  :||||.:.|..
plant   166 NLRGGLTTLNQLMIVIGSSVSFLIGSLISWKTLALTGLAPCIV--LLFGLCF--IPESPRWLAKA 226

  Fly   233 GRKSEALKSLQFLRGQSAEGVHDEMAEIQANVEE-AMASKGTVMDLF-KNAGNRRALFICAGLIS 295
            |.:.|...:||.|||:.|: :.:|...||.:::. .:..|..:.||. |..|  |::.|...|:.
plant   227 GHEKEFRVALQKLRGKDAD-ITNEADGIQVSIQALEILPKARIQDLVSKKYG--RSVIIGVSLMV 288

  Fly   296 FQQLSGINVVLFNSQSIFASA--NTGLDPAIATIIIGCVQVGSSALTPLVADRLGRKVMLLTSSS 358
            |||..|||.:.|.:...|..|  .:|   .:.||.|.||||..:.|..::.|:.||:.:::.|:.
plant   289 FQQFVGINGIGFYASETFVKAGFTSG---KLGTIAIACVQVPITVLGTILIDKSGRRPLIMISAG 350

  Fly   359 VMSIGLAALGAFFYMQLVKGDISSVVWMP---VPALIIYNIVYCTGFGPLPWAVLGEMFPANIKS 420
            .:.:|....|..|   |:||....:.|:|   |..::||...:..|.||:||.::.|:||.|:|.
plant   351 GIFLGCILTGTSF---LLKGQSLLLEWVPSLAVGGVLIYVAAFSIGMGPVPWVIMSEIFPINVKG 412

  Fly   421 VASSVVASTCWTLGFLVTF---FYPSLDALGSYYAFWLFAVCMVVAFFFVLFVVMETKGLSLQQI 482
            :|.|:|....|:..:.|::   |..|..:.|::|.:..||...::   ||..:|.||||.:|::|
plant   413 IAGSLVVLVNWSGAWAVSYTFNFLMSWSSPGTFYLYSAFAAATII---FVAKMVPETKGKTLEEI 474

  Fly   483 Q 483
            |
plant   475 Q 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1213NP_001246937.1 SP 42..482 CDD:273317 133/453 (29%)
MFS 47..460 CDD:119392 125/426 (29%)
AT5G18840NP_568367.1 MFS_GLUT6_8_Class3_like 45..473 CDD:340916 133/451 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 1 1.000 - - FOG0000275
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48021
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.920

Return to query results.
Submit another query.