DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1213 and AT5G17010

DIOPT Version :9

Sequence 1:NP_001246937.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_001318578.1 Gene:AT5G17010 / 831564 AraportID:AT5G17010 Length:503 Species:Arabidopsis thaliana


Alignment Length:508 Identity:145/508 - (28%)
Similarity:249/508 - (49%) Gaps:48/508 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SISRE--EETGVQYSYTEVSTFQ---IREGNTRTMSPEPVKSGRIFMAAVAANLSAFVVGTTLGW 62
            |:|||  :.:|      |:|..:   |:|.:.    ||........:..:...|...:.|..:|.
plant    13 SVSREFGKSSG------EISPEREPLIKENHV----PENYSVVAAILPFLFPALGGLLYGYEIGA 67

  Fly    63 TSPIGPKLKSEDTSDSPLSRPITSDEDAWISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFF 127
            ||.....|:|...|...... ::|.:...::|....|||....||..:||.|||:..|:.::|.:
plant    68 TSCATISLQSPSLSGISWYN-LSSVDVGLVTSGSLYGALFGSIVAFTIADVIGRRKELILAALLY 131

  Fly   128 VLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQLFIVGGILYV 192
            ::...:..:|....:|.:.|:|.|..||..|...|||:.|.:...:||...||.:.|||.|::..
plant   132 LVGALVTALAPTYSVLIIGRVIYGVSVGLAMHAAPMYIAETAPSPIRGQLVSLKEFFIVLGMVGG 196

  Fly   193 YAIGP-----YVSYQALQWCCIVVPVVFDLVFYMMPESPYF-----FAGKG----RKSEALKSLQ 243
            |.||.     :..::.:....:.:.|:..:..:.:|.||.:     ..|||    ::..|:|||.
plant   197 YGIGSLTVNVHSGWRYMYATSVPLAVIMGIGMWWLPASPRWLLLRVIQGKGNVENQREAAIKSLC 261

  Fly   244 FLRG-----QSAEGVHDEMAEIQANVEEAMASKGTVMDLFKNAGNRRALFICAGLISFQQLSGIN 303
            .|||     .:||.|::.:||:....|:...:.|   :||:.. ..:||.|..||:.|||::|..
plant   262 CLRGPAFVDSAAEQVNEILAELTFVGEDKEVTFG---ELFQGK-CLKALIIGGGLVLFQQITGQP 322

  Fly   304 VVLFNSQSIFASA--NTGLDPAIATIIIGCVQVGSSALTPLVADRLGRKVMLLTSSSVMSIGLAA 366
            .||:.:.||..:|  :...|....:|::|.:::..:.:..:|.|||||:.:||.....|.:.|..
plant   323 SVLYYAPSILQTAGFSAAGDATRVSILLGLLKLIMTGVAVVVIDRLGRRPLLLGGVGGMVVSLFL 387

  Fly   367 LGAFFYMQLVKGDISSVVWMPVPALIIYNIVYCTGFGPLPWAVLGEMFPANIKSVASSVVASTCW 431
            ||: :|:......:.:||     ||::|...|...|||:.|.::.|:||..::....|:.....:
plant   388 LGS-YYLFFSASPVVAVV-----ALLLYVGCYQLSFGPIGWLMISEIFPLKLRGRGLSLAVLVNF 446

  Fly   432 TLGFLVTF-FYPSLDALGSYYAFWLFAVCMVVAFFFVLFVVMETKGLSLQQIQ 483
            ....|||| |.|..:.||:...|..|.|..|::..|:.|:|.|||||:|::|:
plant   447 GANALVTFAFSPLKELLGAGILFCGFGVICVLSLVFIFFIVPETKGLTLEEIE 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1213NP_001246937.1 SP 42..482 CDD:273317 133/461 (29%)
MFS 47..460 CDD:119392 123/434 (28%)
AT5G17010NP_001318578.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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