DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1213 and PGLCT

DIOPT Version :9

Sequence 1:NP_001246937.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_568328.1 Gene:PGLCT / 831472 AraportID:AT5G16150 Length:546 Species:Arabidopsis thaliana


Alignment Length:495 Identity:136/495 - (27%)
Similarity:237/495 - (47%) Gaps:37/495 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ETGVQ--YSYTEVSTFQIR-----EGNTRTMSP---EPVKSGRIFMAAVAANLSAFVVGTTLGWT 63
            :.|:|  .|::.|....:|     :|:.....|   |...||.:......|.|.|.:.|..||  
plant    62 DNGIQSVMSFSSVKARSVRAQASSDGDEEEAIPLRSEGKSSGTVLPFVGVACLGAILFGYHLG-- 124

  Fly    64 SPIGPKLKSEDTSDSPLSRPITSDED----AWISSLIAVGALVAPFVAGPMADRIGRKWVLLSSS 124
             .:...|:.       |::.:...|:    .||.|.:..||.|..|..|.:||:.||.......:
plant   125 -VVNGALEY-------LAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGALADKFGRTRTFQLDA 181

  Fly   125 LFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQLFIVGGI 189
            :...:...|...|..|..:.:.||:.|.|:|....:.|:|:.|||...:|||.||:.||||..||
plant   182 IPLAIGAFLCATAQSVQTMIVGRLLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICIGI 246

  Fly   190 LYVYAIGPYVSYQALQW-----CCIVVPVVFDLVFYMMPESPYFFAGKGRKSEALKSLQFLRGQS 249
            |.....|..::...|.|     ..::..|:..:.....||||.:...:|:.|||.|:::.|.|: 
plant   247 LAALIAGLPLAANPLWWRTMFGVAVIPSVLLAIGMAFSPESPRWLVQQGKVSEAEKAIKTLYGK- 310

  Fly   250 AEGVHDEMAEIQANVEEAMASKGTVMDLFKNAGNRRALFICAGLISFQQLSGINVVLFNSQSIFA 314
             |.|.:.:.::.|:.:.:...:....||| ::...:.:.:.|.|..||||:|||.|::.|.|:|.
plant   311 -ERVVELVRDLSASGQGSSEPEAGWFDLF-SSRYWKVVSVGAALFLFQQLAGINAVVYYSTSVFR 373

  Fly   315 SANTGLDPAIATIIIGCVQVGSSALTPLVADRLGRKVMLLTSSSVMSIGLAALGAFFYMQLVKGD 379
            ||....|.| |:.::|...|..:|:...:.|::|||.:||||...|::.:..|...|..:.:...
plant   374 SAGIQSDVA-ASALVGASNVFGTAVASSLMDKMGRKSLLLTSFGGMALSMLLLSLSFTWKALAAY 437

  Fly   380 ISSVVWMPVPALIIYNIVYCTGFGPLPWAVLGEMFPANIKSVASSVVASTCWTLGFLVTFFYPS- 443
            ..:   :.|...::|.:.:..|.||:|..:|.|:|.:.|::.|.::.....|...|::..::.| 
plant   438 SGT---LAVVGTVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSV 499

  Fly   444 LDALGSYYAFWLFAVCMVVAFFFVLFVVMETKGLSLQQIQ 483
            :...|....:..||...|:|..::...|:||||.||::|:
plant   500 VTKFGISSVYLGFAGVCVLAVLYIAGNVVETKGRSLEEIE 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1213NP_001246937.1 SP 42..482 CDD:273317 125/449 (28%)
MFS 47..460 CDD:119392 116/422 (27%)
PGLCTNP_568328.1 MFS 109..524 CDD:119392 118/431 (27%)
Sugar_tr 111..539 CDD:278511 125/444 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100060
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.710

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