DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1213 and STP6

DIOPT Version :9

Sequence 1:NP_001246937.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_187247.1 Gene:STP6 / 819766 AraportID:AT3G05960 Length:507 Species:Arabidopsis thaliana


Alignment Length:412 Identity:113/412 - (27%)
Similarity:194/412 - (47%) Gaps:34/412 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 SSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFV 157
            :|.:.:.||||.|||.....::||:..:..:|:||::..||...|..:.:|.:.||..||||||.
plant    83 TSSLYLAALVASFVASATCSKLGRRPTMQFASIFFLIGVGLTAGAVNLVMLIIGRLFLGFGVGFG 147

  Fly   158 MTVQPMYVGEISTDNVRGATGSLMQLFIVGGIL-------YVYAIGPYVSYQALQWCCIV----V 211
            ....|:::.||:...:||....:.||.:..|||       :...:.||      .|...:    :
plant   148 NQAVPLFLSEIAPAQLRGGLNIVFQLMVTIGILIANIVNYFTATVHPY------GWRIALGGAGI 206

  Fly   212 PVVFDLVF--YMMPESPYFFAGKGRKSEALKSLQFLRGQSAEGVHDEMAEIQANVEEAMASKGTV 274
            |.|. |:|  .::.|:|.....:.:..|..::|:.:||  .:.::||...|....:.|...|...
plant   207 PAVI-LLFGSLLIIETPTSLIERNKNEEGKEALRKIRG--VDDINDEYESIVHACDIASQVKDPY 268

  Fly   275 MDLFKNAGNRRALFICAGLIS-FQQLSGINVVLFNSQSIFASANTGLDPA-IATIIIGCVQVGSS 337
            ..|.|.|.  |..||...|:. |||.:|||.::|.:..:|.:...|.|.| ::.:|.|.:.|.::
plant   269 RKLLKPAS--RPPFIIGMLLQLFQQFTGINAIMFYAPVLFQTVGFGSDAALLSAVITGSINVLAT 331

  Fly   338 ALTPLVADRLGRKVMLLTSSSVMSIGLAALGAFFYMQLVKGDISSVVWMP-VPALIIYNIVYCTG 401
            .:...:.||.||:.:||.||..|.|....:|......|   .::..:..| ...::|:..||..|
plant   332 FVGIYLVDRTGRRFLLLQSSVHMLICQLIIGIILAKDL---GVTGTLGRPQALVVVIFVCVYVMG 393

  Fly   402 F----GPLPWAVLGEMFPANIKSVASSVVASTCWTLGFLVTFFYPSLDALGSYYAFWLFAVCMVV 462
            |    |||.|.:..|.||...:|...:|..|......|::...:.|:........|:.|:..::|
plant   394 FAWSWGPLGWLIPSETFPLETRSAGFAVAVSCNMFFTFVIAQAFLSMLCGMRSGIFFFFSGWIIV 458

  Fly   463 AFFFVLFVVMETKGLSLQQIQD 484
            ...|..|.:.||||:::..:::
plant   459 MGLFAFFFIPETKGIAIDDMRE 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1213NP_001246937.1 SP 42..482 CDD:273317 113/408 (28%)
MFS 47..460 CDD:119392 106/386 (27%)
STP6NP_187247.1 MFS_STP 27..469 CDD:340919 109/399 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

Return to query results.
Submit another query.