DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1213 and AT3G05150

DIOPT Version :9

Sequence 1:NP_001246937.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_001326594.1 Gene:AT3G05150 / 819677 AraportID:AT3G05150 Length:483 Species:Arabidopsis thaliana


Alignment Length:452 Identity:140/452 - (30%)
Similarity:234/452 - (51%) Gaps:24/452 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 SGRIFMAAVAANLSAFVVGTTLGWTSPIGPKLKSE-DTSDSPLSRPITSDEDAWISSLIAVGALV 102
            |..::::.:.|...::..||.:|:::|....:..| :.|.|..|         ...|::.:||::
plant    32 SWMVYLSTIIAVCGSYEFGTCVGYSAPTQFGIMEELNLSYSQFS---------VFGSILNMGAVL 87

  Fly   103 APFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGE 167
            ....:|.::|.||||..:..||:...:.:.:..:|.....|...|.:.|:|.|.:..|.|:::.|
plant    88 GAITSGKISDFIGRKGAMRLSSVISAIGWLIIYLAKGDVPLDFGRFLTGYGCGTLSFVVPVFIAE 152

  Fly   168 ISTDNVRGATGSLMQLFIVGGILYVYAIGPYVSYQALQWCCIVVPVVFDLVFYMMPESPYFFAGK 232
            ||...:|||..:|.|||||.|:..::.||..|:::.|....:...||.....:.:||||.:....
plant   153 ISPRKLRGALATLNQLFIVIGLASMFLIGAVVNWRTLALTGVAPCVVLFFGTWFIPESPRWLEMV 217

  Fly   233 GRKSEALKSLQFLRGQSAEGVHDEMAEIQANVEEAMAS-----KGTVMDLFKNAGNRRALFICAG 292
            ||.|:...:||.|||..| .:..|..|||    |.:||     |.|:|||. :..|.|.:.:..|
plant   218 GRHSDFEIALQKLRGPQA-NITREAGEIQ----EYLASLAHLPKATLMDLI-DKKNIRFVIVGVG 276

  Fly   293 LISFQQLSGINVVLFNSQSIFASANTGLDPAIATIIIGCVQVGSSAL-TPLVADRLGRKVMLLTS 356
            |:.|||..|||.|:|.:|.||.||  |..|.:.:|:....||..:|| ..|:.|||||:.:|:.|
plant   277 LMFFQQFVGINGVIFYAQQIFVSA--GASPTLGSILYSIEQVVLTALGATLLIDRLGRRPLLMAS 339

  Fly   357 SSVMSIGLAALGAFFYMQLVKGDISSVVWMPVPALIIYNIVYCTGFGPLPWAVLGEMFPANIKSV 421
            :..|.||...:|..|.::.....:..:..:.|..:::|...:..|.|.:||.::.|:||.|:|..
plant   340 AVGMLIGCLLIGNSFLLKAHGLALDIIPALAVSGVLVYIGSFSIGMGAIPWVIMSEIFPINLKGT 404

  Fly   422 ASSVVASTCWTLGFLVTFFYPSLDALGSYYAFWLFAVCMVVAFFFVLFVVMETKGLSLQQIQ 483
            |..:|....|...:||:|.:..|.....:..|:::....|:|..|:..:|.||||.:|::||
plant   405 AGGLVTVVNWLSSWLVSFTFNFLMIWSPHGTFYVYGGVCVLAIIFIAKLVPETKGRTLEEIQ 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1213NP_001246937.1 SP 42..482 CDD:273317 137/446 (31%)
MFS 47..460 CDD:119392 128/419 (31%)
AT3G05150NP_001326594.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 1 1.000 - - FOG0000275
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100060
Panther 1 1.100 - - O PTHR48021
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.820

Return to query results.
Submit another query.