DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1213 and INT3

DIOPT Version :10

Sequence 1:NP_649599.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_181117.1 Gene:INT3 / 818146 AraportID:AT2G35740 Length:580 Species:Arabidopsis thaliana


Alignment Length:592 Identity:141/592 - (23%)
Similarity:232/592 - (39%) Gaps:144/592 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EEETGVQYSYTEVSTFQIREGNTRTMSPEPVKSGRIFMAAVAANLSAFVVGTTLGWTSPIGPKLK 71
            |.....|.:.|||.|       |...:|      .|...|::|.:...:.|...|..:.....:|
plant     4 EASKSEQINITEVWT-------TTWETP------YIMRLALSAGIGGLLFGYNTGVIAGALLYIK 55

  Fly    72 SEDTSDSPLSRPITSDEDAWISSLI----AVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFG 132
            .|...         .|...|:..:|    ..||:|...:.|...|:.||:..:|.:.:.|:|...
plant    56 EEFGE---------VDNKTWLQEIIVSMTVAGAIVGAAIGGWYNDKFGRRMSVLIADVLFLLGAL 111

  Fly   133 LNMVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQLFIVGG--------I 189
            :.::|...|::.:.||:.|||||......|:|:.|:|...:|||..|...|.|.||        :
plant   112 VMVIAHAPWVIILGRLLVGFGVGMASMTSPLYISEMSPARIRGALVSTNGLLITGGQFLSYLINL 176

  Fly   190 LYVYAIGPYVSYQALQWCCIV--VPVVFDLVFYM-MPESPYFFAGKGRKSEALKSLQFLRGQSAE 251
            .:|:..|.:      :|...|  :|.:......: :||||.:.....||:|:...|:  |...||
plant   177 AFVHTPGTW------RWMLGVSAIPAIIQFCLMLTLPESPRWLYRNDRKAESRDILE--RIYPAE 233

  Fly   252 GVHDEMAEIQANVEEAMASKGTVMDLFKNAGNRRALF-------ICAGLI--SFQQLSGINVVLF 307
            .|..|:|.::.:|....|.:..:...|.:. .|.||.       :.||:.  ..||..|||.|::
plant   234 MVEAEIAALKESVRAETADEDIIGHTFSDK-LRGALSNPVVRHGLAAGITVQVAQQFVGINTVMY 297

  Fly   308 NSQSI-----FASANTGLDPAIATIIIGCVQVGSSALTPLVADRLGRKVMLLTSSSVMSIGLAAL 367
            .|.:|     :||..|.:  |:|.|..|...|| |.::.:..||.||:.:::.|...:...|..|
plant   298 YSPTILQFAGYASNKTAM--ALALITSGLNAVG-SVVSMMFVDRYGRRKLMIISMFGIITCLVIL 359

  Fly   368 GAFF-----------------------------------------YMQLVKGDI----------- 380
            .|.|                                         .|:.::.|.           
plant   360 AAVFNEASNHAPKIDKRDSRNFAKNATCPAFAPFTASRSPPSNWNCMKCLQYDCGFCSNGAQEYA 424

  Fly   381 ----------------------------SSVVWMPVPALIIYNIVYCTGFGPLPWAVLGEMFPAN 417
                                        |...::.:..|.:|.|||..|.|.:||.|..|::|..
plant   425 PGACIVQSADMKALCHSKGRTFFKDGCPSKFGYLAIVFLGLYIIVYAPGMGTVPWIVNSEIYPLR 489

  Fly   418 IKSVASSVVASTCWTLGFLVTFFYPSL-DALGSYYAFWLFAVCMVVAFFFVLFVVMETKGLSLQQ 481
            .:.:|..:.|.:.|....:|:..:.:| :|:||...|.|||....|..||:..:|.|||||..::
plant   490 YRGLAGGIAAVSNWMSNLVVSETFLTLTNAVGSSGTFLLFAGSSAVGLFFIWLLVPETKGLQFEE 554

  Fly   482 IQDRLNG 488
            ::..|.|
plant   555 VEKLLEG 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1213NP_649599.1 MFS_GLUT6_8_Class3_like 43..481 CDD:340916 130/547 (24%)
INT3NP_181117.1 MFS_HMIT_like 32..546 CDD:340918 124/534 (23%)

Return to query results.
Submit another query.