DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1213 and PMT2

DIOPT Version :9

Sequence 1:NP_001246937.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_179210.1 Gene:PMT2 / 816110 AraportID:AT2G16130 Length:511 Species:Arabidopsis thaliana


Alignment Length:530 Identity:137/530 - (25%)
Similarity:234/530 - (44%) Gaps:76/530 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SREEETGVQYSYTEVSTFQIREGNTRTMSPEPVKSGRIFMAAVAANLSAFVVGTTLGWTSPIGPK 69
            |..||.||..:.:|              .|...:|...|..|:.|::::.::|..:|..|.....
plant     3 SSGEERGVVVAESE--------------PPRGNRSRFAFACAILASMTSIILGYDIGVMSGAAIF 53

  Fly    70 LKSEDTSDSPLSRPITSDEDAWISSLIAVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLN 134
            :| :|...|.:...|       :..::.:.:|:....||..:|.|||::.::.:..||.....|.
plant    54 IK-DDLKLSDVQLEI-------LMGILNIYSLIGSGAAGRTSDWIGRRYTIVLAGFFFFCGALLM 110

  Fly   135 MVASEVWILYMSRLIQGFGVGFVMTVQPMYVGEISTDNVRGATGSLMQLFIVGGIL------YVY 193
            ..|:....:.:.|.:.|.|||:.|.:.|:|..|::..:.||...|..::||..|||      |.:
plant   111 GFATNYPFIMVGRFVAGIGVGYAMMIAPVYTTEVAPASSRGFLSSFPEIFINIGILLGYVSNYFF 175

  Fly   194 AIGPYVSYQALQWCCIV----VPVVFDLVFYM-MPESPYFFAGKGR--------------KSEAL 239
            |..|    :.:.|..::    ||.||..:..: |||||.:...:||              |.||:
plant   176 AKLP----EHIGWRFMLGIGAVPSVFLAIGVLAMPESPRWLVMQGRLGDAFKVLDKTSNTKEEAI 236

  Fly   240 KSLQFLRGQSAEGVHDEMA-EIQANVEEAMASKGTVMDLF--KNAGNRRALFICAGLISFQQLSG 301
            ..|..::  .|.|:.|:|. ::.....:..|.||...||.  .....|..|..|.|:...||.||
plant   237 SRLNDIK--RAVGIPDDMTDDVIVVPNKKSAGKGVWKDLLVRPTPSVRHILIACLGIHFSQQASG 299

  Fly   302 INVVLFNSQSIFASANTGL----DPAIATIIIGCVQVGSSALTPLVADRLGRKVMLLTSSSVMSI 362
            |:.|:..|.:||:.|  ||    |..:||:.:|.|:.....:...:.||.||:.:||||...|..
plant   300 IDAVVLYSPTIFSRA--GLKSKNDQLLATVAVGVVKTLFIVVGTCLVDRFGRRALLLTSMGGMFF 362

  Fly   363 GLAALGAFFYMQLVKGDISSVVW---MPVPALIIYNIVYCTGFGPLPWAVLGEMFPANIKSVASS 424
            .|.|||....: :.:....::.|   :.|..::.:...:..|.||:.|....|:||..:::..:|
plant   363 SLTALGTSLTV-IDRNPGQTLKWAIGLAVTTVMTFVATFSLGAGPVTWVYASEIFPVRLRAQGAS 426

  Fly   425 VVASTCWTLGFLVTFFYPSLD---ALGSYYAFWLFAVCMVVAFFFVLFVVMETKGLSLQQIQD-- 484
            :.......:..::...:.||.   .:|.  ||.|||...|.|:.|....:.||:|:.|::|:.  
plant   427 LGVMLNRLMSGIIGMTFLSLSKGLTIGG--AFLLFAGVAVAAWVFFFTFLPETRGVPLEEIESLF 489

  Fly   485 ---RLNGKRN 491
               ..|.|.|
plant   490 GSYSANKKNN 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1213NP_001246937.1 SP 42..482 CDD:273317 125/477 (26%)
MFS 47..460 CDD:119392 116/450 (26%)
PMT2NP_179210.1 Sugar_tr 29..489 CDD:278511 125/478 (26%)
MFS 31..473 CDD:119392 119/460 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.900

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