DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1213 and PMT1

DIOPT Version :10

Sequence 1:NP_649599.1 Gene:CG1213 / 40728 FlyBaseID:FBgn0037387 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_179209.1 Gene:PMT1 / 816109 AraportID:AT2G16120 Length:511 Species:Arabidopsis thaliana


Alignment Length:486 Identity:128/486 - (26%)
Similarity:223/486 - (45%) Gaps:52/486 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 EPVKSGR---IFMAAVAANLSAFVVGTTLGWTSPIGPKLKSEDTSDSPLSRPITSDEDAWISSLI 96
            ||.:..|   .|..|:.|::::.::|..:|..|.....:| :|...|.:...|       :..::
plant    16 EPPRGNRSRYAFACAILASMTSIILGYDIGVMSGASIFIK-DDLKLSDVQLEI-------LMGIL 72

  Fly    97 AVGALVAPFVAGPMADRIGRKWVLLSSSLFFVLAFGLNMVASEVWILYMSRLIQGFGVGFVMTVQ 161
            .:.:||....||..:|.:||::.::.:..||.....|...|:....:.:.|.:.|.|||:.|.:.
plant    73 NIYSLVGSGAAGRTSDWLGRRYTIVLAGAFFFCGALLMGFATNYPFIMVGRFVAGIGVGYAMMIA 137

  Fly   162 PMYVGEISTDNVRGATGSLMQLFIVGGILYVYAIGPYVSY--QALQWCCIV----VPVVFDLVFY 220
            |:|..|::..:.||...|..::||..|||..|....:.|.  :.|.|..::    ||.||..:..
plant   138 PVYTAEVAPASSRGFLTSFPEIFINIGILLGYVSNYFFSKLPEHLGWRFMLGVGAVPSVFLAIGV 202

  Fly   221 M-MPESPYFFAGKGR--------------KSEALKSLQFLRGQSAEGVHDEMA-EIQANVEEAMA 269
            : |||||.:...:||              |.||:..|..::  .|.|:.|:|. ::.....:..|
plant   203 LAMPESPRWLVLQGRLGDAFKVLDKTSNTKEEAISRLDDIK--RAVGIPDDMTDDVIVVPNKKSA 265

  Fly   270 SKGTVMDLF--KNAGNRRALFICAGLISFQQLSGINVVLFNSQSIFASANTGL----DPAIATII 328
            .||...||.  .....|..|..|.|:...||.|||:.|:..|.:||:.|  ||    |..:||:.
plant   266 GKGVWKDLLVRPTPSVRHILIACLGIHFAQQASGIDAVVLYSPTIFSKA--GLKSKNDQLLATVA 328

  Fly   329 IGCVQVGSSALTPLVADRLGRKVMLLTSSSVMSIGLAALGAFFYMQLVKGDISSVVW---MPVPA 390
            :|.|:.....:...|.||.||:.:||||...|.:.|.|||....: :.:....::.|   :.|..
plant   329 VGVVKTLFIVVGTCVVDRFGRRALLLTSMGGMFLSLTALGTSLTV-INRNPGQTLKWAIGLAVTT 392

  Fly   391 LIIYNIVYCTGFGPLPWAVLGEMFPANIKSVASSVVASTCWTLGFLVTFFYPSLD---ALGSYYA 452
            ::.:...:..|.||:.|....|:||..:::..:|:.......:..::...:.||.   .:|.  |
plant   393 VMTFVATFSIGAGPVTWVYCSEIFPVRLRAQGASLGVMLNRLMSGIIGMTFLSLSKGLTIGG--A 455

  Fly   453 FWLFAVCMVVAFFFVLFVVMETKGLSLQQIQ 483
            |.|||.....|:.|....:.||:|:.|::::
plant   456 FLLFAGVAAAAWVFFFTFLPETRGIPLEEME 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1213NP_649599.1 MFS_GLUT6_8_Class3_like 43..481 CDD:340916 125/471 (27%)
PMT1NP_179209.1 MFS_PLT 32..485 CDD:340995 123/467 (26%)

Return to query results.
Submit another query.